Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00300 ATGGCTACATCACAGGAAACCAATAGCGGTGAAGCCATGCAACTTAAACACGTTGAAGAAGACCAAGATGGCATCCTCTTTGCCATGAACATGGTTTCTTCTGTGGTGTACCCTCTTGCGGTTAAGACCGCGATTGAGCTTGGTATCTTTGACATCATGGCCAAAGCAGGTGAAGGTGCGAAGCTCTCAGCAGAAGAGATTACAGAAAAAGTTGGCATAAAGAACCCAGAAGCACCAACTATGGTGGATCGGATTCTGAGGCTATTGGCTAGTCACTCCATGCTATCTTCATGTCTTGGTGAAGATGGCCAAAATTCTGGCAAGAGGCTCTATAGCCTCACCTATGCATCCAAGTATTTTGTTGCTGATGCTGATGGTGTCTCATTTGGAGCTTCCATGAACTTGATTCTTGGCAAGGTCTTCTTGGAAACCTGGACCGAGCTGAAAGGATCCATCGTAGAAGGTGGCATAGCATTCAACAGGGTTTATGGGATGAACGTATTTGAGTATTCAGCTGTGGATCCTGGGTACAATGATGTTTTCAACAAAGCTATGTTCAACATTACCACCATAATCACGAATAGGGTTCTTGAGCTCTACGATGGTTTCAAGAACATTAACAGGCTCGTGGATGTTGGTGGTGGTCTTGGGATCAATCTCAAACTCATCACTTCTAAATATCCCAATGTTCAAGGTGTTAATTTTGACTTGCCACATGTCATAGAACATGCCCCTACCTACCCTGGTGTGGAACATGTCGCAGGAGATATGTTTGAGAGTGTTCCCAATGGAGACGCCATTTTTATGAAGTGGATACTTCACGATTGGAGTGATGAACAGTGTTTGAAGTTGTTGAAGAATTGCTATAAAGCTATTCCGAGTGATGGAAAAGTGATTGTTGTGGACTTGATCATTCCCGTTTTGCCAGAGAATACAGTTACTTCCAAGAATGTTTCCCAAGCTGACTGCTTGATGATGGGTTATACCGCTGGAGGGAAAGAGAGAACCCAAAATGAGTTCATGGAATTGGCATTATCTTCTGGATTCACTGGCATCAGATTCGTTTGTCCTGTCTCTGGCTTCTGGGTTATGGAGTTTTTCAAGTAG 1107 0.4381 MATSQETNSGEAMQLKHVEEDQDGILFAMNMVSSVVYPLAVKTAIELGIFDIMAKAGEGAKLSAEEITEKVGIKNPEAPTMVDRILRLLASHSMLSSCLGEDGQNSGKRLYSLTYASKYFVADADGVSFGASMNLILGKVFLETWTELKGSIVEGGIAFNRVYGMNVFEYSAVDPGYNDVFNKAMFNITTIITNRVLELYDGFKNINRLVDVGGGLGINLKLITSKYPNVQGVNFDLPHVIEHAPTYPGVEHVAGDMFESVPNGDAIFMKWILHDWSDEQCLKLLKNCYKAIPSDGKVIVVDLIIPVLPENTVTSKNVSQADCLMMGYTAGGKERTQNEFMELALSSGFTGIRFVCPVSGFWVMEFFK* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00300 368 Gene3D - 7 120 IPR036388 -
Lapu10g00300 368 FunFam Caffeic acid O-methyltransferase 121 368 - -
Lapu10g00300 368 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 29 368 IPR016461 GO:0008168
Lapu10g00300 368 SUPERFAMILY "Winged helix" DNA-binding domain 19 123 IPR036390 -
Lapu10g00300 368 Gene3D Vaccinia Virus protein VP39 122 368 IPR029063 -
Lapu10g00300 368 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 127 366 IPR029063 -
Lapu10g00300 368 PIRSF O-mtase 5 368 IPR016461 GO:0008168
Lapu10g00300 368 CDD AdoMet_MTases 208 305 - -
Lapu10g00300 368 Pfam Dimerisation domain 40 90 IPR012967 GO:0046983
Lapu10g00300 368 Pfam O-methyltransferase domain 145 349 IPR001077 GO:0008171
Lapu10g00300 368 FunFam Caffeic acid 3-O-methyltransferase 6 120 - -
Lapu10g00300 368 PANTHER O-METHYLTRANSFERASE 28 354 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00300 Lapu-Chr10 5319295 5322825 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00300 1 368 Monolignol Biosynthesis Gene Families AT5G54160 49.864 2.10e-134 386
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00300 K13066 - gmx:100789402 601.668