Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00296 ATGGAAGCACAAAGCTCTCAGCAAACGCAAGTTATTGAGATCAGTGGAGATCTTCCTGATGGCGGAAGAAAGATTTGTGGTGAAGCACCATGTGGGTTTGCAGATGCCGAATCCATCTCCAAGGATTCTGAAGAAAGATCAACTTCTATGCGAAAGCTCCTTATGGCAGTGATCCTTTGTGTTATTTTCATGACTGTTGAAGTGGTTGGTGGCATCAAAGCTAACAGTCTTGCTATACTGACTGATGCAGCACATTTGCTTTCTGATGTTGCAGCCTTTGCTATCTCCTTATTTTCTTTATGGGCTGCTGGATGGGAAGCTACACCTCGCCAGTCATATGGATTTTTCCGAATAGAGATTCTTGGTGCCTTGGTTTCTATCCAATTAATATGGTTGCTTGCTGGTATTCTGGTATATGAAGCCATTGATAGGATCATTGCTGGTCCTAAAAGCGTGGATGGTTTCTTAATGTTTTTGGTTTCCGCATTCGGTCTTGTGGTTAATATCATCATGGCTTTGTTATTGGGTCATGATCATGGTCACGGCCATGGTCATGGTCATGGACACGGACACGGTCATGGACACGGACACAGTCACGGACATAGTCATGATAGTCATGGCCACAGTCATGCAATAACGGTGTCTACCCATCATGACGCAAAGCATACAATAGATGAGCACCATCACGATGAAAAGCATTCAAAAGATGCTATCCGTCATACTCATGAAGATCACCTGCACCATCATGATCACAAAGAGCTTACTCAACCTCTTCTTGATGAATCAAAAGGTGGAACTAAGAAGAAGAAGCAATGGAACATAAATGTACAGGGGGCTTATCTCCATGTACTTGGAGACTCTATCCAGAGTATTGGAGTAATGATCGGGGGAGCAGTCATATGGTATAAACCCGAGTGGCAAATAGTTGATTTAATTTGCACTCTAATATTTTCAGTAATTGTTTTGGTGACAACCATCAATATGCTGCGAAATATTTTGGAAGTACTGATGGAGAGCACACCTCGTGAGATAGATGCCACTAAGCTTGAAAGGGGGTTGTTGGATATGGAAGATGTAGTGGCTGTTCATGAACTGCATATATGGGCCATTACAGTGGGAAAGGTTTTACTAGCTTGTCATGTTAAAATCAGACGTGAAGCAGATGCAGACATGGTGCTGGACAAGGTTATAGACTATATCAAAAGGGTCTATAACATCAGTCACGTAACCATTCAGATAGAGCGCTAG 1248 0.4263 MEAQSSQQTQVIEISGDLPDGGRKICGEAPCGFADAESISKDSEERSTSMRKLLMAVILCVIFMTVEVVGGIKANSLAILTDAAHLLSDVAAFAISLFSLWAAGWEATPRQSYGFFRIEILGALVSIQLIWLLAGILVYEAIDRIIAGPKSVDGFLMFLVSAFGLVVNIIMALLLGHDHGHGHGHGHGHGHGHGHGHSHGHSHDSHGHSHAITVSTHHDAKHTIDEHHHDEKHSKDAIRHTHEDHLHHHDHKELTQPLLDESKGGTKKKKQWNINVQGAYLHVLGDSIQSIGVMIGGAVIWYKPEWQIVDLICTLIFSVIVLVTTINMLRNILEVLMESTPREIDATKLERGLLDMEDVVAVHELHIWAITVGKVLLACHVKIRREADADMVLDKVIDYIKRVYNISHVTIQIER* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00296 415 MobiDBLite consensus disorder prediction 181 209 - -
Lapu10g00296 415 SUPERFAMILY Cation efflux protein transmembrane domain-like 47 338 IPR027469 -
Lapu10g00296 415 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 22 415 - -
Lapu10g00296 415 Pfam Cation efflux family 53 337 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Lapu10g00296 415 MobiDBLite consensus disorder prediction 182 204 - -
Lapu10g00296 415 Gene3D Cation efflux protein transmembrane domain 49 336 IPR027469 -
Lapu10g00296 415 NCBIfam cation diffusion facilitator family transporter 50 415 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Lapu10g00296 415 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 343 414 IPR036837 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00296 Lapu-Chr10 5267401 5272443 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00296 1 415 Inorganic Solute Cotransporters AT2G46800 66.429 1.67e-173 489
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00296 K14689 - gmx:100790458 678.707
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu10g00296 10 5267401 5272443 Lapu10g00296 10 5267401 5272443 ECH