Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lapu10g00289 | ATGGGGGGTGGTAACATCAATTCAAGTGAATACAATGATACAACTTTTACCAAAATCTTTGTTGGAGGCTTAGCTTGGGAGACTCAAGGGGACACAGTGAGAAGGTATTTTGAACAGTTTGGAGAGATTTTAGAAGCTGTTGTTATCACAGATAAGAACACTGGAAGATCCAAGGGTTATGGTTTTATCACATTCAAGGATCCAAAGATGGCAATGAAAGCATGCCAAAACCCTTATCCAATAATTGATGGAAGGAAGACAAATTGCAATATTGCATCTATTGGTGCAAACAAGAATCGTAGGCAGGCTCCACAACATGGTCGGGTTAGAGCAGCACCTGGTTTGTTGGCTTCACCTGATTATCATGGTCCTTCCTCTCCATTTGTCCATCAAAACAATGTGCAATACACATTTCCAGATTCAAGTTTTGGATATATTCAACATTCACTTGACATGATGTACCCCATGAACTGTTACGGAATACTTGGAGGGCAACAGTTTTCAGCATACTACCCCTATATTGGGGCATCTGAACCTATAGGATTGGTCCATAACACTTACCCTTTTTCTGCACAATATGCACACAGTAGCCAGGCTCAAGGTTTTGGAGTCCATTATCCCCAAATGATGCAATTTCCAGTTATTCCTGGGAATTATATGTCAGCTGGTATCCTTAGATTTCCTTCTCCAATGGAAATGCCAACTACTAGTGCAGACTTGTACCCTTCCTAA | 732 | 0.4098 | MGGGNINSSEYNDTTFTKIFVGGLAWETQGDTVRRYFEQFGEILEAVVITDKNTGRSKGYGFITFKDPKMAMKACQNPYPIIDGRKTNCNIASIGANKNRRQAPQHGRVRAAPGLLASPDYHGPSSPFVHQNNVQYTFPDSSFGYIQHSLDMMYPMNCYGILGGQQFSAYYPYIGASEPIGLVHNTYPFSAQYAHSSQAQGFGVHYPQMMQFPVIPGNYMSAGILRFPSPMEMPTTSADLYPS* | 244 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lapu10g00289 | 243 | SUPERFAMILY | RNA-binding domain, RBD | 16 | 104 | IPR035979 | GO:0003676 | |
Lapu10g00289 | 243 | SMART | rrm1_1 | 18 | 90 | IPR000504 | GO:0003723 | |
Lapu10g00289 | 243 | Gene3D | - | 5 | 110 | IPR012677 | - | |
Lapu10g00289 | 243 | CDD | RRM_RBM24_RBM38_like | 17 | 92 | - | - | |
Lapu10g00289 | 243 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 19 | 76 | IPR000504 | GO:0003723 | |
Lapu10g00289 | 243 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 17 | 94 | IPR000504 | GO:0003723 | |
Lapu10g00289 | 243 | PANTHER | BOULE-RELATED | 8 | 216 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lapu10g00289 | Lapu-Chr10 | 5194528 | 5196231 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lapu10g00289 | 6 | 93 | C2H2 Transcription Factor Family | AT2G19380 | 42.045 | 1.71e-15 | 73.6 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lapu10g00289 | - | - | gmx:100786226 | 378.252 |