Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00286 ATGGCTACCACAACTCGAGTTTTTCTCTACTTTTCCAACATCATTATCCTTAACCTCGTTAATACATTGGCTCACTCTCATAACTATATCATCCACATGGACAAATCAGCCATGCCCAAAGCATTTTCCTCTCATCACGCTTGGTATTTGTCCACTCTTTCCTCTGCGTTAGATAATGCTCAACTCACACAAACCACCAATCATAATAATCTTAACACTGCTTCTTCTAAGCTGATTTACACTTACACCAACGCCATGAATGGTTTTAGTGCAAATTTGTCACCCAAGGAATTTGAAGCCCTCAAAACCTCCCCGGGTTACATTTCTTCCATACCAGATCTGCCAACCAAGCTTGACACAACGCACTCACCAGAATTCCTTGGCCTCAATCCCAACACAGGAGCTTGGCCTGCTGCGAAATTTGGTGAAGATGTCATTGTTGGGTTGGTGGACTCTGGAGTTTGGCCAGAAAGTGAAAGCTTCAACGATGAAGGGATGCCTGATAAACTTCCTTTACGATGGTATGGCAATTGTGAAAGTAGTATCAAATGCAACAACAAACTCATTGGAGCTAGGTTCTTTAACAAAGGGTTGCTTGCCAGTGGTCAGCGATCAAAATTGGCTACAATTGTGAACTCAACCAGGGACACACAAGGTCATGGGACTCACACATCTTCCACCGCAGTTGGGAGCCAAGTTAACAATGCATCATTCTTTGGATATGCCAATGGATCAGCGAAAGGAGTTGCTTCAAGGGCCAGATTAGCCGTGTATAAGGTCGTGTGGGATGATAAGATTTTCACATCTGATGTAATAGCTGCAATTGATACAGCAATATCAGATGGGGTTGATATTCTTTCCTTATCACTTGGCTTTGATGATTCACCATTGTTCGATGACCCTGTTGCTATAGCAACATTTGCAGCCATGGAAAGAGGCATCTTTGTGTCCACGTCTGCAGGGAATGCCGGGCCTGGTCATGGAAGTCTCCACAATGGAATACCATGGGTCATAAACGTGGCTGCTGGCACTTTGGATCGTGAATGTCACGGGAGTCTTACTCTTGCCAATGGTGTCAACATATCTGGCTTATCACTCTATCTAGGAAACTTCTCAGCAGACCAAGTTCCTATTGTTTTTATGGGCGCATGTGACAATTTAACGAAACTGGCCAATGCACGTAGCAAGATTGTGGTGTGTGAGGATGTGAGTGGAAATCTTGCCAATATAGTGTCTAATATCGACACTGCAAATGTTTCAGCATCAGTGTTCATTTCAAGATTCACCGACGTTTCATTTTTTCCCCAGCATAGTTTTGCAGGCATCATTATAAACCCGAGAAATGGTGAAATTCTCAAAGCTTACATCACGAGTAACTCTGATGCAAAAGCAAGCATGTCTTTCAAGATAACAGCTTTAGGTATTCAACCTGCACCGAGTGTGGATTTTTATAGTTCTAGAGGGCCATCAAATAGTTGCCCATTTGTGTTGAAACCGGACATCACCGCTCCTGGTACATCAATCTTAGCTGCATGGCCTCAAAATATTCCAGTGGCATTGTCTGGAACACAAGCCCTTTACAGTGACTTTAATTTCTTAACTGGAACATCCATGGCATGCCCTCATGTGACAGGTGTGGCAACATTGTTAAGAGGAGCACATCCTTATTGGAGCCCTGCGGCTATTAGGTCAGCCATTATGACAACATCGGATATATTCGACAACACTAAGGAACTCATCAAAGACATTGGTGATGGAGGCAAACCAGCCTCTCCTTTAGCTATGGGAGCTGGTAATATCAATCCCAACAAAGCCCTGGACCCGGGACTTGTTTACGACGTGGGAGTTCAAGATTATGTCAATCTTCTCTGCGCAATGAACTTCACTCAACAGAACATCACAGCCATCACAAGATCCTCTTCCTACAATTGTTCCAAACCTTCCTTGGATCTTAACTACCCTTCTTTCATTGCTTTCTTTAGTGGCAGTGGTTCTTCTAACGGGTCAACGGTAACTTGGGAATTTCTGAGAACAGTGACCAATGTTGGGGAGGGACAAACGATCTATTCTGCTAGTGTTACACCAATCAAAGGGTTTAATGTCAGCATCATCCCAAGCAAGTTGGTGTTTAAGCAGAAGAACGAGAAGCAAAGTTACAAGTTAAGGATTGAAGGTCCAAAGATAGAGAGTTTCGGGTACCTCACTTGGACTGACGTGAAACATGTGGTGAGGAGTCCTATTGTGATCACCCATCCACCATCCTCACTTTAA 2271 0.4368 MATTTRVFLYFSNIIILNLVNTLAHSHNYIIHMDKSAMPKAFSSHHAWYLSTLSSALDNAQLTQTTNHNNLNTASSKLIYTYTNAMNGFSANLSPKEFEALKTSPGYISSIPDLPTKLDTTHSPEFLGLNPNTGAWPAAKFGEDVIVGLVDSGVWPESESFNDEGMPDKLPLRWYGNCESSIKCNNKLIGARFFNKGLLASGQRSKLATIVNSTRDTQGHGTHTSSTAVGSQVNNASFFGYANGSAKGVASRARLAVYKVVWDDKIFTSDVIAAIDTAISDGVDILSLSLGFDDSPLFDDPVAIATFAAMERGIFVSTSAGNAGPGHGSLHNGIPWVINVAAGTLDRECHGSLTLANGVNISGLSLYLGNFSADQVPIVFMGACDNLTKLANARSKIVVCEDVSGNLANIVSNIDTANVSASVFISRFTDVSFFPQHSFAGIIINPRNGEILKAYITSNSDAKASMSFKITALGIQPAPSVDFYSSRGPSNSCPFVLKPDITAPGTSILAAWPQNIPVALSGTQALYSDFNFLTGTSMACPHVTGVATLLRGAHPYWSPAAIRSAIMTTSDIFDNTKELIKDIGDGGKPASPLAMGAGNINPNKALDPGLVYDVGVQDYVNLLCAMNFTQQNITAITRSSSYNCSKPSLDLNYPSFIAFFSGSGSSNGSTVTWEFLRTVTNVGEGQTIYSASVTPIKGFNVSIIPSKLVFKQKNEKQSYKLRIEGPKIESFGYLTWTDVKHVVRSPIVITHPPSSL* 757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00286 756 ProSiteProfiles Serine proteases, subtilase domain profile. 115 606 - -
Lapu10g00286 756 FunFam Subtilisin-like protease SBT1.5 144 358 - -
Lapu10g00286 756 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 19 118 IPR037045 -
Lapu10g00286 756 CDD PA_subtilisin_like 352 465 - -
Lapu10g00286 756 FunFam Subtilisin-like protease SBT1.9 18 119 - -
Lapu10g00286 756 ProSitePatterns Serine proteases, subtilase family, serine active site. 535 545 IPR023828 -
Lapu10g00286 756 Pfam Subtilase family 142 598 IPR000209 GO:0006508|GO:0008236
Lapu10g00286 756 SUPERFAMILY Subtilisin-like 118 610 IPR036852 GO:0004252|GO:0006508
Lapu10g00286 756 Pfam Fibronectin type-III domain 650 749 IPR041469 -
Lapu10g00286 756 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 29 748 IPR045051 -
Lapu10g00286 756 Gene3D - 346 473 - -
Lapu10g00286 756 PRINTS Subtilisin serine protease family (S8) signature 216 229 IPR015500 -
Lapu10g00286 756 PRINTS Subtilisin serine protease family (S8) signature 142 161 IPR015500 -
Lapu10g00286 756 PRINTS Subtilisin serine protease family (S8) signature 534 550 IPR015500 -
Lapu10g00286 756 Gene3D Peptidase S8/S53 domain 144 619 IPR036852 GO:0004252|GO:0006508
Lapu10g00286 756 CDD Peptidases_S8_3 117 571 IPR034197 -
Lapu10g00286 756 Gene3D - 623 751 - -
Lapu10g00286 756 Pfam Peptidase inhibitor I9 29 118 IPR010259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00286 Lapu-Chr10 5167791 5170061 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00286 1 738 Subtilisin-like Serine Gene Family AT5G67090 43.701 0.0 584
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00286 - - gmx:100787831 1069.3