Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00284 ATGGGGAAGAAGGGAAGTGGTAGTTCATGGTTAACTGCTGTCAAAAGAGCATTCAGATCTCCCACCAAAGACAGTGACAAAAGGAGTGGCAGAAGAAGAGAAGATTGTGATCAAGAAGAAGACGAAGAAAAGAAAAGGGAAAAGAGAAGATGGATTTTCAGGAAGACTCACATGAGTCATGAAGGAGTGAACAGCAACAATACTCAACAAAAGTTGAAGCATGATGCGGCGACAGCTAGTGGGGGTTCAAAGACAGACCAGGATCAGAAGCATGCACTTGCGGTGGCGGTGGCCACTGCAGAAGCCGCCAAGGCCACCGCTCAGGCTGCGGCGGAGGTGGCAAGGTTGACCAAACCTTCTAGCCATGCAAGGGAGCATTATGCTGCTGTTGTGATCCAAACAGCTTTCAGAGGGTATCTGGCTAGAAGAGCACTTCGTGCACTAAAGGGGTTGGTGAAGTTGCAAGCTTTGGTTAGGGGTCACAATGTTAGGAAGCAGGCAAAGATGACCCTTAGATGCATGCAGGCTTTGGTTAGAGTTCAAGCAAGGGTCCTTGACCAGCGCATAAGGTCTTCACTTGACGGTAGCAGAAAATCCACTTTCAGTGACACCGCCAGTGTTTGGGACTCACGGTATCTTCAGGATATTTCAGATAGAAAATCAATATCAAGAGAGGGGAGCAGCATTGCAGATGACTGGGATGAACGTCCCCACACAGTTGAAGAAGTGAAGGCTATGTTGCAGCAGAGGAAGGAAGCTGCAATGAAGAGGGACAAGACCTTATCCCAAGCCTTTTCCCAACAGATTTGGAGGAATGGTAGGACATCATCAATTGGAAATGAAGATGAGTTGGAAGAGAGACCAAAATGGCTAGATCGGTGGATGGCCACAAAGCCATGGGAGAATAGAGGAAGGGCTTCAACTGATCAAAGAGACCCTATTAAGACAGTGGAGATTGACACCTCTCAGCCTTATTCATATCTAGGAACCAATTACAGAAGATCACATCCAAATTATCAATATAATCCAAACCACCATCAACCCCAAAGGCATTCCATTGCTTCTCCACTCCATAGATCTCACCAAAATGGATCCCTTCACCAATCCCCTGCAACCCCTTCTCCTGCCAAATCAAGGCCCATCCAAGTCCGGTCAGCAAGCCCGCGTTGTGTTAGAGAAGACAGAAACTACCCCACCTCTCAAACACCAAGCTTGAGGTCCAATTACCACTACACAGGAAACTTGTACCAAAATGGAAGAGCTGTTGGAACTGGAACTGGAACTAGTAGTGGTGGTGCTACGTTGCCTAATTACATGGCGGCAACGGAGTCTGCAAAGGCTCGAATTCGGTCACAAAGTGCTCCGAGGCAGAGGCCATCCACACCAGAGAGGGACAGGGTTGGATCAGCAAAGAAAAGGCTTTCTTTTCCTGCTCCTGACCCTTATAGCGTGGGAGCGAGTTATGGAAATTATGGGCATAGTTTAAGGAGTCCAAGCTTCAAGAGTGTGAGTGGATCACACTTTGGGTTGGAGCAGCAGTCGAACTACTCCTCTTGCTGCACTGAAAGCCTTGGTGGTGGTGAGGTTTCTCCTTCTTCAACTGGTGACCTTAGGAGAGGAGTCCAGCTGGACAGACTTTTGTTCACTGAAACTCATAATCAGAGGTTTCTTGGAATTATGAGCTGTTTGGGGTCCCATCTTACTGAACACACTACTGGTTAG 1722 0.4779 MGKKGSGSSWLTAVKRAFRSPTKDSDKRSGRRREDCDQEEDEEKKREKRRWIFRKTHMSHEGVNSNNTQQKLKHDAATASGGSKTDQDQKHALAVAVATAEAAKATAQAAAEVARLTKPSSHAREHYAAVVIQTAFRGYLARRALRALKGLVKLQALVRGHNVRKQAKMTLRCMQALVRVQARVLDQRIRSSLDGSRKSTFSDTASVWDSRYLQDISDRKSISREGSSIADDWDERPHTVEEVKAMLQQRKEAAMKRDKTLSQAFSQQIWRNGRTSSIGNEDELEERPKWLDRWMATKPWENRGRASTDQRDPIKTVEIDTSQPYSYLGTNYRRSHPNYQYNPNHHQPQRHSIASPLHRSHQNGSLHQSPATPSPAKSRPIQVRSASPRCVREDRNYPTSQTPSLRSNYHYTGNLYQNGRAVGTGTGTSSGGATLPNYMAATESAKARIRSQSAPRQRPSTPERDRVGSAKKRLSFPAPDPYSVGASYGNYGHSLRSPSFKSVSGSHFGLEQQSNYSSCCTESLGGGEVSPSSTGDLRRGVQLDRLLFTETHNQRFLGIMSCLGSHLTEHTTG* 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00284 573 ProSiteProfiles IQ motif profile. 125 153 IPR000048 GO:0005515
Lapu10g00284 573 MobiDBLite consensus disorder prediction 301 316 - -
Lapu10g00284 573 SMART iq_5 147 168 IPR000048 GO:0005515
Lapu10g00284 573 SMART iq_5 124 146 IPR000048 GO:0005515
Lapu10g00284 573 MobiDBLite consensus disorder prediction 317 381 - -
Lapu10g00284 573 ProSiteProfiles IQ motif profile. 149 176 IPR000048 GO:0005515
Lapu10g00284 573 PANTHER IQ-DOMAIN 5-RELATED 1 478 - -
Lapu10g00284 573 Gene3D - 122 178 - -
Lapu10g00284 573 FunFam IQ-domain 11 124 175 - -
Lapu10g00284 573 MobiDBLite consensus disorder prediction 443 478 - -
Lapu10g00284 573 MobiDBLite consensus disorder prediction 301 408 - -
Lapu10g00284 573 Pfam IQ calmodulin-binding motif 128 146 IPR000048 GO:0005515
Lapu10g00284 573 Pfam IQ calmodulin-binding motif 152 168 IPR000048 GO:0005515
Lapu10g00284 573 Pfam Protein of unknown function (DUF4005) 387 491 IPR025064 -
Lapu10g00284 573 MobiDBLite consensus disorder prediction 19 57 - -
Lapu10g00284 573 MobiDBLite consensus disorder prediction 1 87 - -
Lapu10g00284 573 MobiDBLite consensus disorder prediction 394 408 - -
Lapu10g00284 573 MobiDBLite consensus disorder prediction 59 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00284 Lapu-Chr10 5085270 5089662 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00284 10 539 IQD Protein Family AT4G00820 58.770 1.34e-180 518
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00284 - - gmx:100786729 935.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu10g00284 10 5085270 5089662 Lapu10g00284 10 5085270 5089662 ECH