Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00282 ATGAGCGGGAAGCCGGCGAGACCTTGTACACGTGTGGGAAAGTACGAGCTCGGAAAAACCATTGGCGAGGGAAGCTTTGCTAAGGTCAAGTTCGCAAGGAACGTTGAGAACGGAAACCATGTAGCCATCAAAATTCTCGACCGTAACCATGTCCTCCGCCACAAGATGATGGAACAGCTGAAGAAAGAAATTTCGGCGATGAAGATGATCAATCATCCAAACGTTGTCAAAATTTATGAAGTGATGGCAAGCAAAACAAAGATCTACATTGTCCTAGAGTTGATTAATGGAGGAGAACTATTTGACAAAATAGCTAGAACTGGGAGACTTAAAGAGGATGAAGCAAGAAATTATTTCCACCAACTAGTCAATGCAGTTGATTACTGCCATAGTAGAGGGGTGTACCACAGGGATTTGAAGCCAGAGAATCTTCTTCTGGACTCCAATGGTATTTTGAAAATTACAGATTTTGGATTAAGTACCTGCGCACAGAAGGAGGATGAACTTCTGCGCACTGCTTGTGGAACTCCAAATTATGTTGCTCCTGAGGTGCTTAATGATAGAGGTTATGTTGGTTCTACATCTGATATCTGGTCCTGCGGAGTCATTCTCTTTGTGCTTATGGCTGGTTACTTGCCCTTTGATGAGCCAAGTCAAATGGCATTGTACAAAAAGATTGGCAAGGCTCAATTTACATGTCCATCATGGTTTTCCTCTGACGCAAAGAAGCTATTGAAGCGTATTCTTGATCCAAGCCCTTTAACAAGGATCAAAGTTCCTGAAATGTTACAAGATGAATGGTTCAAAAAAGGATACAAACCAGCAATTTTTACAGAGGAAGAGGATGTCAATGTAGATGATGTCGCTGCTGCTTTCAATGATTCTAAGGAAAATTTTGTGACAGAGAGAAAAGAGAAACCAGTGTCAATGAATGCTTTTGAGCTCATATCTAGGTCTCAAAGCTTCAATCTTGAGAATTTGTTTGAGAAGCAGACGAATGGGATCGTTAAGAGAGAAACACATTTTACGTCACAACGTCCAGCAAATGAAATCATGTCAAAAATTGAGGAAGCTGCCAAGCCTCTGGGATTTAATGTTCACAAGCGAAATTATAAGATGAAGCTGCAAGGTGATAAGAGCGGAAGGAAGGGTCACCTTTCAGTAGCTACAGAGGTTTTTGAAGTGGCTCCCTCCTTGCACATGGTGGAGCTTCGAAAGACTGGGGGTGACACACTGGAGTTTCATAAGTTCTACAAAATCTTTTCATCAGGGTTGCAAGACATAGTTTGGCACTCTGAAGCAAAAATATGA 1311 0.4172 MSGKPARPCTRVGKYELGKTIGEGSFAKVKFARNVENGNHVAIKILDRNHVLRHKMMEQLKKEISAMKMINHPNVVKIYEVMASKTKIYIVLELINGGELFDKIARTGRLKEDEARNYFHQLVNAVDYCHSRGVYHRDLKPENLLLDSNGILKITDFGLSTCAQKEDELLRTACGTPNYVAPEVLNDRGYVGSTSDIWSCGVILFVLMAGYLPFDEPSQMALYKKIGKAQFTCPSWFSSDAKKLLKRILDPSPLTRIKVPEMLQDEWFKKGYKPAIFTEEEDVNVDDVAAAFNDSKENFVTERKEKPVSMNAFELISRSQSFNLENLFEKQTNGIVKRETHFTSQRPANEIMSKIEEAAKPLGFNVHKRNYKMKLQGDKSGRKGHLSVATEVFEVAPSLHMVELRKTGGDTLEFHKFYKIFSSGLQDIVWHSEAKI* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00282 436 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Lapu10g00282 436 SUPERFAMILY Protein kinase-like (PK-like) 12 301 IPR011009 -
Lapu10g00282 436 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 10 416 - -
Lapu10g00282 436 Gene3D Kinase associated domain 1, KA1 304 431 - -
Lapu10g00282 436 ProSiteProfiles NAF domain profile. 305 329 IPR018451 GO:0007165
Lapu10g00282 436 SMART serkin_6 15 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu10g00282 436 ProSitePatterns Serine/Threonine protein kinases active-site signature. 134 146 IPR008271 GO:0004672|GO:0006468
Lapu10g00282 436 Pfam Protein kinase domain 15 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu10g00282 436 CDD CIPK_C 311 419 - -
Lapu10g00282 436 Pfam NAF domain 307 368 IPR004041 GO:0007165
Lapu10g00282 436 FunFam Non-specific serine/threonine protein kinase 304 431 - -
Lapu10g00282 436 Gene3D Phosphorylase Kinase; domain 1 6 94 - -
Lapu10g00282 436 ProSiteProfiles Protein kinase domain profile. 15 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu10g00282 436 FunFam Non-specific serine/threonine protein kinase 7 94 - -
Lapu10g00282 436 Gene3D Transferase(Phosphotransferase) domain 1 95 296 - -
Lapu10g00282 436 FunFam Non-specific serine/threonine protein kinase 8 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00282 Lapu-Chr10 5048579 5054346 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00282 1 434 CBL-interacting serine-threonine protein kinases AT1G01140 72.135 0.0 672
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Lapu10g00282 Pkinase 5.3e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00282 - - gmx:100794136 816.224