Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00277 ATGGGTCAGTGCTACGGCAAGTCCAATCATCTCACGCCGGAAAATGATGCAGCCGCCACAGGGGAAGCTGCCGTCGACACCGTCGTCGCGGTGGCCGGATCCGCTGACGCCCCGCTCTCTCCGCTCCCGGTGAAGGGCACGCCGGCGCGGGCGAGTCCCTGGCCCAGTCCCTACCCACACGGTGGCGGCGTGACGCCGTCCCCGGCGAGAGGTACGCCGAGGAGATTTTTCCGGCGGTCGTTCGCGCCTCCATCGCCAGCAAAGCACATAAGGGCGTCGCTGGCGAAGCGGCTTGGGCACGCGAAGACGCCGAAAGAGGGGCCGATCCCGGAGGAAGAAGCGGCAGCGGCGGTGGCGACGGAACAGTCGCTGGATAAGAGCTTTGGGTATGGTAAGAATTTTGGGGCGAAATATGAAATTGGGAAAGAAGTTGGTCGAGGGCATTTTGGTCACACTTGTTATGCTAAGGGGAAGAAGGGCGAACTCAAAGACCAACCTGTTGCTGTTAAAATCATTTCCAAGGCGAAGATGACAACTGCAATAGCAATTGAAGATGTTCGCAGAGAGGTGAAGATATTAAAAGCTCTGTCTGGCCATAAACATCTTGTCAAATATCATGATGCTTTTGAAGATGCCAACAATGTGTACATAGTTATGGAATTGTGTGAAGGTGGAGAGCTTCTTGACAGAATTTTGTCAAGGGGAGGAAAATATTCAGAGGAGGATGCCAAGGTTATAGTTTTGCAGATCCTAAGTGTAGTTGCTTTTTGTCATCTTCAAGGTGTTGTGCACCGTGACCTTAAACCTGAGAATTTCCTCTTCACTTCAAGAAGTGAAGATGCTGACATGAAGCTTATTGATTTTGGTCTATCTGACTTCATCCGGCCAGATGAACGGCTGAATGACATTGTTGGGAGTGCATATTATGTTGCACCTGAGGTCCTTCACAGGTCATATAGTCTGGAAGCAGATATATGGAGTATTGGTGTTATTACCTATATCTTATTATGTGGAAGTCGACCTTTCTGGGCACGAACAGAATCTGGAATTTTTCGTGCAGTGCTTAGAGCTGATCCTAACTTTGATGATTTACCTTGGCCTACAGCCTCTGCAGAGGCCAAGGACTTTGTAAAACGGCTTCTAAACAAGGACTACAGGAAAAGAATGACAGCTGTCCAAGCTCTAAGTCATCCTTGGTTGAGGGATGACAGCCGTCCAATCCCTTTAGATATATTAGTTTATAAACTAGTGAAGGCTCATCTTCTTGCAACACCACTCAAACGAGCAGCAGTGAAGGCACTTTCGAAAGCCTTGCCAGAGGATGAATTGCCCTACCTTAGGGCACAATTCAGATTGTTGGAACCAAATAGAGACGGACTTATCTCCCTTGACAATTTCAAAATGGCTCTTGTACACAATGCAACTGATGCAATGAGGGAGTCAAGGGTTGTTGAGATCATAAATGCGATGGAGCCACTTGCATATAGAAAGATGGACTTTGAAGAATTTTGTGCAGCTGCAATTAGCACATACCAATTGGAAGCTCTTGATAGGTGGGAAGATATTGCCTCAACTGCATTTGAACATTTTGAGACAGAAGGCAACCGTCTGATATCGGTTGAAGAATTGGCCAGAGAGTTGAATCTTGGGCCTTCAGCTTATTCAATTCTCAAAGACTGGATAAGAAATACTGATGGAAAGCTTAGTTTACTTGGATATACAAAATTTTTGCATGGTGTGACTCTCCGTAGTTCAAACCCAAGACACAGATAG 1773 0.4726 MGQCYGKSNHLTPENDAAATGEAAVDTVVAVAGSADAPLSPLPVKGTPARASPWPSPYPHGGGVTPSPARGTPRRFFRRSFAPPSPAKHIRASLAKRLGHAKTPKEGPIPEEEAAAAVATEQSLDKSFGYGKNFGAKYEIGKEVGRGHFGHTCYAKGKKGELKDQPVAVKIISKAKMTTAIAIEDVRREVKILKALSGHKHLVKYHDAFEDANNVYIVMELCEGGELLDRILSRGGKYSEEDAKVIVLQILSVVAFCHLQGVVHRDLKPENFLFTSRSEDADMKLIDFGLSDFIRPDERLNDIVGSAYYVAPEVLHRSYSLEADIWSIGVITYILLCGSRPFWARTESGIFRAVLRADPNFDDLPWPTASAEAKDFVKRLLNKDYRKRMTAVQALSHPWLRDDSRPIPLDILVYKLVKAHLLATPLKRAAVKALSKALPEDELPYLRAQFRLLEPNRDGLISLDNFKMALVHNATDAMRESRVVEIINAMEPLAYRKMDFEEFCAAAISTYQLEALDRWEDIASTAFEHFETEGNRLISVEELARELNLGPSAYSILKDWIRNTDGKLSLLGYTKFLHGVTLRSSNPRHR* 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00277 590 ProSitePatterns Protein kinases ATP-binding region signature. 144 170 IPR017441 GO:0005524
Lapu10g00277 590 ProSitePatterns Serine/Threonine protein kinases active-site signature. 262 274 IPR008271 GO:0004672|GO:0006468
Lapu10g00277 590 MobiDBLite consensus disorder prediction 36 88 - -
Lapu10g00277 590 FunFam CDPK-related kinase 1 436 508 - -
Lapu10g00277 590 SUPERFAMILY Protein kinase-like (PK-like) 130 415 IPR011009 -
Lapu10g00277 590 Gene3D - 422 580 - -
Lapu10g00277 590 FunFam CDPK-related kinase 1 131 226 - -
Lapu10g00277 590 SUPERFAMILY EF-hand 427 579 IPR011992 -
Lapu10g00277 590 CDD STKc_CAMK 137 399 - -
Lapu10g00277 590 ProSiteProfiles EF-hand calcium-binding domain profile. 441 476 IPR002048 GO:0005509
Lapu10g00277 590 Pfam Protein kinase domain 138 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu10g00277 590 FunFam CDPK-related kinase 3 130 302 - -
Lapu10g00277 590 Gene3D Phosphorylase Kinase; domain 1 132 227 - -
Lapu10g00277 590 MobiDBLite consensus disorder prediction 99 118 - -
Lapu10g00277 590 Gene3D Transferase(Phosphotransferase) domain 1 228 417 - -
Lapu10g00277 590 MobiDBLite consensus disorder prediction 48 62 - -
Lapu10g00277 590 SMART serkin_6 138 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu10g00277 590 ProSiteProfiles Protein kinase domain profile. 138 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu10g00277 590 FunFam Calcium-dependent protein kinase SK5 310 409 - -
Lapu10g00277 590 PANTHER SERINE/THREONINE-PROTEIN KINASE 122 565 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00277 Lapu-Chr10 4969885 4978442 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00277 1 584 EF-hand Containing Proteins AT3G50530 58.954 0.0 720
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lapu10g00277 Pkinase 9.6e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00277 - - gmx:100796256 1046.19