Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00276 ATGGGTATGGGAGAGAAGAGTCCAAGGAGTTCCCAATTGCACCATCGTGATGGGAAGAAGCAGGAGTTCAGAGGGGTTCCAAAAGGGTGCATGGCAATCAAAGTTGGTCAAGGGGAAGAGCAACAAAGGTTCGTGGTTCCTGTCATTTACATCAACCACCCTCTCTTCATGCAGCTTCTCAAGGAGGCAGAGGAAGAATACGGCTTCGACCAGAAGGGAACCATAACCATCCCTTGCCATGTTGAGGAATTCAGAAACGTTCGGGGCTTGATTGATAGAGACAAGTCCCTTCACCACCACCATCATGTTGGTTGCTTTGGCTTCTGA 327 0.4924 MGMGEKSPRSSQLHHRDGKKQEFRGVPKGCMAIKVGQGEEQQRFVVPVIYINHPLFMQLLKEAEEEYGFDQKGTITIPCHVEEFRNVRGLIDRDKSLHHHHHVGCFGF* 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00276 108 MobiDBLite consensus disorder prediction 1 25 - -
Lapu10g00276 108 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 16 86 IPR003676 GO:0009733
Lapu10g00276 108 MobiDBLite consensus disorder prediction 9 24 - -
Lapu10g00276 108 Pfam Auxin responsive protein 20 87 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00276 Lapu-Chr10 4956648 4957641 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00276 26 104 Calmodulin-binding Proteins AT5G20810 46.250 1.01e-18 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00276 K14488 - gmx:111188139 179.104