Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00275 ATGTGTGAGAGTGAAGAAAACCACTTGGGAGAAGTTCCAGCGACCAATCGTCCATGCCCCCATCAGCAGCAGAGAATGAAAGTGGTGATTAAAGATATTCCAAAAGGGTTTTTGCCAATCAAGGTAGGGCAAGGTGAAGAGCAAGAGAAAATTGTGATGCCTATTATGTACCTCAACCACCCTTTGTTCTCTCAGCTACTGAAAGAGGCAGAAGAAGAGTATGGTTTTGATCAGCAAGGAACCATAATAATCCCTTGCCATGTGAAGGACTTTAGGTACGTTCAAGACCTCATTCATAAGGAGTTATCCACCCAACACCACCACCACCACCATGTCATTAGCTGTTTTAGGCCTCCACGTTAG 363 0.4463 MCESEENHLGEVPATNRPCPHQQQRMKVVIKDIPKGFLPIKVGQGEEQEKIVMPIMYLNHPLFSQLLKEAEEEYGFDQQGTIIIPCHVKDFRYVQDLIHKELSTQHHHHHHVISCFRPPR* 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00275 120 MobiDBLite consensus disorder prediction 1 21 - -
Lapu10g00275 120 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 27 93 IPR003676 GO:0009733
Lapu10g00275 120 Pfam Auxin responsive protein 27 97 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00275 Lapu-Chr10 4941993 4942662 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00275 32 106 Calmodulin-binding Proteins AT5G20810 44.000 9.00e-17 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00275 K14488 - pvu:PHAVU_010G117400g 194.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu10g00275 10 4941993 4942662 Lapu10g00275 10 4941993 4942662 ECH