Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00272 ATGAGTTCAAATACCAAAACTTTTACCTTTGAGGAGGTAGCTGAGCACAATCACAAGAAGGATTGTTGGATTATAGTCAAAGGGAAGGTGTATGATGTGACCTCATTTTTGGATGATCATCCTGGAGGTGATGAAGTTTTAGTGACCGCGACAGAGAAGGATGCCACCACTGATTTTGAAGATATTGGCCACAGTGAGTCAGCAATTGAGATGATGCAAACATACTTTGTTGGGGAGGTTGACACCACCTCTCTTCCAGCAGCACAAGTTGCCAAAAACACTCCTCGCCCACCTACACAAGCACCTGCCTACAACAATCAATCTGCTGGATTTGTGAAGATCTTGCAGTACCTGGTGCCATTGCTGATATTGGGCCTTGCTTTTGCTCTGCAGTACTATGGCAAAAAAAACAAGTCCACTGAATCAGAAAATTGA 435 0.4368 MSSNTKTFTFEEVAEHNHKKDCWIIVKGKVYDVTSFLDDHPGGDEVLVTATEKDATTDFEDIGHSESAIEMMQTYFVGEVDTTSLPAAQVAKNTPRPPTQAPAYNNQSAGFVKILQYLVPLLILGLAFALQYYGKKNKSTESEN* 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00272 144 PANTHER CYTOCHROME B5 3 135 - -
Lapu10g00272 144 SMART Cyt_b5_2 8 81 IPR001199 -
Lapu10g00272 144 Pfam Cytochrome b5-like Heme/Steroid binding domain 9 80 IPR001199 -
Lapu10g00272 144 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 5 81 IPR001199 -
Lapu10g00272 144 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 36 43 IPR018506 GO:0020037
Lapu10g00272 144 FunFam Cytochrome b5 type B 2 85 - -
Lapu10g00272 144 PRINTS Cytochrome B5 signature 68 80 IPR001199 -
Lapu10g00272 144 PRINTS Cytochrome B5 signature 40 54 IPR001199 -
Lapu10g00272 144 PRINTS Cytochrome B5 signature 55 62 IPR001199 -
Lapu10g00272 144 PRINTS Cytochrome B5 signature 30 40 IPR001199 -
Lapu10g00272 144 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 4 86 IPR036400 -
Lapu10g00272 144 Gene3D - 1 84 IPR036400 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00272 Lapu-Chr10 4860142 4864841 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00272 1 137 NADPH P450 reductases AT5G53560 56.835 8.05e-56 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00272 K23490 - gmx:100305546 239.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g01911 6 18971484 18976983 Lapu10g00272 10 4860142 4864841 PCT