Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00264 ATGTACCATAATGCCCTCATAATATTGGTGAATTTCGACAAAAGCATGAAGGTTCCAATGGAGGAGAAACCATTCCCTGCATGGTCATGGTCTGTTGAACAGTGTTTAAAAGAGTATGGAGTGAAACTGGACAAGGGTCTGAGTACTCATGAGGTTCAGAAACGGCGCGAGAAGTATGGTTGGAACGAGTTAGCAAAGGAGAAAGGGAAGCCCTTGTGGGAACTAGTGTTGGAACAATTTGATGACATGCTGGTGAAGATACTTTTGGCTGCAGCCTTCGTATCATTTCTTTTGGCTTACTTTCACGGAAGTGACTCAGGGGAGTCTGGATTTGAGGCATATGTGGAGCCACTTGTGATCATTTTGATTTTGGTCCTTAATGCCATTGTCGGAGTTTGGCAAGAGAACAATGCCGAGAAGGCTCTAGAAGCCCTCAAAGAGTTGCAATGTGAGTCTGGGAAAGTGTTAAGGGATGGCTATTTTGTGCCAGATTTGCCTGCCAGAGAGCTTCTTCCTGGTGATATTGTGGAGTTGCATGTTGGAGATAAGGTCCCGGCTGATATGAGAGTAGCGGCTTTGAAAACCTCAACATTGAGGGTTGAACAAAGTTCTTTAACTGGAGAAGCAATGCCAGTTCTCAAGGGGACAAATCCTGTTTTCTTGGAAGACTGTGAGTTGCAGGCTAAAGAAAACATGGTATTTGCAGGCACCACCGTTGTCAATGGGAGTTGTGTAGGCATTGTTATCACCACGGGAATGGACACTGAAATTGGAAAGATACAGAAGCAGATACATGAGGCTTCTCAAGAGGACAGTGACACCCCTTTGAAGAAGAAGCTGGATGAGTTTGGTAACAGGCTCACCACTGCAATTGGCGTAGTTTGTCTCATTGTTTGGGTTATCAACTACAAGAATTTTATTTCTTGGGATGTTGTGGATGGATGGCCCTCAAACATAAAATTTTCATTCCAAAAGTGTACCTACTATTTCAAAATTGCTGTTGCCCTTGCAGTTGCTGCAATCCCTGAAGGCCTTCCTGCTGTTATCACAACTTGTTTAGCACTCGGTACACGGAAAATGGCTCAAAAGAATGCAATTGTGAGAAAGCTTCCTAGTGTGGAAACTTTGGGATGTACTACTGTGATATGTTCAGACAAAACTGGCACTTTGACGACAAATCAGATGGCTGTGACACAGTTCTTTACTTTGGGAGGGAAAACCACTGCTTCAAGACTCATTAAAGTTGAAGGCACAACTTATGATCCCAAAGACGGGGGAATTGTTGACTGGGGATGCTATAACATGGATGCTAATTTGCAAGTCATGGCTGAAATATGTGCTATTTGTAATGATGCTGGGATTTACTCCGATGGTCGCCTTTTTAGAGCCTCAGGTTTGCCTACTGAAGCTGCTCTCAAAGTGTTGGTTGAAAAGATGGGAGTTTCAGATGTGAAGTCAAGGAGTAAAACTCGTGATAATGCACAACTTGATGCAAACAACTTGATGGATGTCAACACTGTTGTGAAGTTAGGATGTTGTGAGTGGTGGAATAAAAGATCCAAAAGGGTAGCTACGTTGGAGTTTGATCGCATTCGGAAGTCAATGAGTGTTATTGTTCGTGAACCAAATGGTCAAAATCGGCTTCTTGTCAAGGGTGCTGTTGAGAGTTTACTGGAGCGTAGTTCACACGTGCAACTTGCTGATGGATCTCTGGTTCCAATAGATAATCAATGTAGGGAACTACTTCTTCAAAGACTCCAGGAGATGAGTTCGAAGGGATTGCGTTGCTTGGGTTTTGCATATAAAGATGAATTAGGAGAATTTTCAGACTATTATGCTGACACTCATCCTGCTCATAAGAAGTTGCTTGATCCAACATACTATTCATCCATTGAAAGTGATCTAGTTTTTGTTGGCATTGTTGGCTTAAGAGATCCTCCTCGTGAGGAAGTTCATAAAGCAATTGAGGATTGTAAGGAAGCTGGCATTAGAGTTATGGTAATAACTGGAGATAATAAGTCAACAGCAGAGGCTATTTGTAGGGAAATCAAATTGTTCTCTAACGATGAGGATCTCAAAGGGCAAAGTTTGACTGGTAAGGAATTCATCACTCTTTCTCATTCAGAACAAGTTAAAATATTGTTGAGACCTGGAGGCAAGGTTTTCTCTCGAGCTGAACCTAGACACAAGCAAGAAATTGTTAGACTACTGAAGGAAATGGGGGAGATCGTTGCAATGACTGGAGATGGTGTGAATGATGCACCTGCACTTAAGCTAGCTGACATAGGGATTGCTATGGGCATAACTGGGACAGAGGTTGCAAAAGAAGCATCAGATATGGTGCTTGCAGATGACAATTTTAGTACCATAGTTTCAGCTGTTGCTGAGGGTCGCTCTATTTATAATAACATGAAGTCATTTATAAGGTACATGATATCATCCAATGTCGGGGAAGTAATATCCATATTCTTGACAGCTGCATTGGGGATCCCAGAGTGCATGATACCAGTGCAACTTCTATGGGTGAATTTGGTTACTGATGGTCCACCGGCAACAGCTCTTGGTTTTAACCCTGCTGATGTTGATATCATGCAGAAGCCACCTCGTAGAAGTGATGATGCATTAATAAGTTCTTGGGTTCTTTTCCGTTATCTGGTAATTGGTTCCTATGTGGGACTAGCAACAGTTGGCATTTTTGTCTTGTGGTACACTCAAGCATCTTTTCTTGGCATCAATCTTGTGAGTGATGGCCACACAATTATAGAATTCTCCCAGCTTCGCAATTGGGGAGAGTGTCCCTCCTGGTCTAATTTTACTGTTGCTCCATTTGATGTTGGAGGGGGTCGCTTGATCACCTTTTCAAATCCTTGTGACTATTTCTCAGTTGGCAAAGTAAAGGCCATGACTCTCTCTCTGTCAGTCTTGGTGGCAATTGAGATGTTCAACTCTTTGAATGCCCTCTCAGAAGATAATAGCTTGAGGAAACTACCACCTTGGAGGAACCCTTGGCTTTTGGTAGCCATGTCAATATCTTTAGGACTCCATTGTCTCATACTCTACACCCCATTCTTTGCAGAAGTGTTTGGAGTTATTCCTCTTAGTTTGAATGAGTGGTTTATGGTCCTGTTAATCTCAGCACCTGTTATTCTTATTGATGAGATTCTGAAGTTAGTAGCGAGGAGTCAAAGGAGATTGACAAAGGAGAAAGAAGCATGA 3216 0.4251 MYHNALIILVNFDKSMKVPMEEKPFPAWSWSVEQCLKEYGVKLDKGLSTHEVQKRREKYGWNELAKEKGKPLWELVLEQFDDMLVKILLAAAFVSFLLAYFHGSDSGESGFEAYVEPLVIILILVLNAIVGVWQENNAEKALEALKELQCESGKVLRDGYFVPDLPARELLPGDIVELHVGDKVPADMRVAALKTSTLRVEQSSLTGEAMPVLKGTNPVFLEDCELQAKENMVFAGTTVVNGSCVGIVITTGMDTEIGKIQKQIHEASQEDSDTPLKKKLDEFGNRLTTAIGVVCLIVWVINYKNFISWDVVDGWPSNIKFSFQKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMAVTQFFTLGGKTTASRLIKVEGTTYDPKDGGIVDWGCYNMDANLQVMAEICAICNDAGIYSDGRLFRASGLPTEAALKVLVEKMGVSDVKSRSKTRDNAQLDANNLMDVNTVVKLGCCEWWNKRSKRVATLEFDRIRKSMSVIVREPNGQNRLLVKGAVESLLERSSHVQLADGSLVPIDNQCRELLLQRLQEMSSKGLRCLGFAYKDELGEFSDYYADTHPAHKKLLDPTYYSSIESDLVFVGIVGLRDPPREEVHKAIEDCKEAGIRVMVITGDNKSTAEAICREIKLFSNDEDLKGQSLTGKEFITLSHSEQVKILLRPGGKVFSRAEPRHKQEIVRLLKEMGEIVAMTGDGVNDAPALKLADIGIAMGITGTEVAKEASDMVLADDNFSTIVSAVAEGRSIYNNMKSFIRYMISSNVGEVISIFLTAALGIPECMIPVQLLWVNLVTDGPPATALGFNPADVDIMQKPPRRSDDALISSWVLFRYLVIGSYVGLATVGIFVLWYTQASFLGINLVSDGHTIIEFSQLRNWGECPSWSNFTVAPFDVGGGRLITFSNPCDYFSVGKVKAMTLSLSVLVAIEMFNSLNALSEDNSLRKLPPWRNPWLLVAMSISLGLHCLILYTPFFAEVFGVIPLSLNEWFMVLLISAPVILIDEILKLVARSQRRLTKEKEA* 1072
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00264 1071 SUPERFAMILY HAD-like 381 851 IPR036412 -
Lapu10g00264 1071 SFLD Haloacid Dehalogenase 364 799 - -
Lapu10g00264 1071 SUPERFAMILY Calcium ATPase, transmembrane domain M 26 1062 IPR023298 -
Lapu10g00264 1071 FunFam Calcium-transporting P-type ATPase, putative 641 792 - -
Lapu10g00264 1071 Gene3D - 78 1060 - -
Lapu10g00264 1071 ProSitePatterns E1-E2 ATPases phosphorylation site. 385 391 IPR018303 -
Lapu10g00264 1071 FunFam Calcium-transporting ATPase, putative 234 379 - -
Lapu10g00264 1071 PRINTS P-type cation-transporting ATPase superfamily signature 771 783 - -
Lapu10g00264 1071 PRINTS P-type cation-transporting ATPase superfamily signature 383 397 - -
Lapu10g00264 1071 PRINTS P-type cation-transporting ATPase superfamily signature 661 671 - -
Lapu10g00264 1071 PRINTS P-type cation-transporting ATPase superfamily signature 639 650 - -
Lapu10g00264 1071 PRINTS P-type cation-transporting ATPase superfamily signature 747 766 - -
Lapu10g00264 1071 PRINTS P-type cation-transporting ATPase superfamily signature 201 215 - -
Lapu10g00264 1071 PANTHER CALCIUM-TRANSPORTING ATPASE 34 1066 - -
Lapu10g00264 1071 FunFam calcium-transporting ATPase, endoplasmic reticulum-type 393 646 - -
Lapu10g00264 1071 Pfam haloacid dehalogenase-like hydrolase 380 761 - -
Lapu10g00264 1071 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 390 643 IPR023299 GO:0000166
Lapu10g00264 1071 FunFam ECA1 (ER-TYPE CA2+-ATPASE 1) 811 1065 - -
Lapu10g00264 1071 Gene3D - 380 792 IPR023214 -
Lapu10g00264 1071 PRINTS Sodium/potassium-transporting ATPase signature 1000 1024 - -
Lapu10g00264 1071 PRINTS Sodium/potassium-transporting ATPase signature 376 397 - -
Lapu10g00264 1071 Pfam Cation transporter/ATPase, N-terminus 28 95 IPR004014 -
Lapu10g00264 1071 Pfam E1-E2 ATPase 149 363 - -
Lapu10g00264 1071 NCBIfam HAD-IC family P-type ATPase 720 831 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lapu10g00264 1071 NCBIfam HAD-IC family P-type ATPase 321 408 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lapu10g00264 1071 Pfam Cation transporting ATPase, C-terminus 832 1058 IPR006068 -
Lapu10g00264 1071 FunFam Calcium-transporting ATPase, putative 130 265 - -
Lapu10g00264 1071 SUPERFAMILY Calcium ATPase, transduction domain A 155 263 IPR008250 -
Lapu10g00264 1071 SFLD p-type atpase 364 799 IPR044492 -
Lapu10g00264 1071 Gene3D - 393 646 IPR023299 GO:0000166
Lapu10g00264 1071 SMART Cation_ATPase_N_a_2 26 100 IPR004014 -
Lapu10g00264 1071 CDD P-type_ATPase_SERCA 28 1060 - -
Lapu10g00264 1071 Gene3D - 45 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00264 Lapu-Chr10 4765764 4771785 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00264 21 1069 Primary Pumps ATPases(2) AT4G00900 78.253 0.0 1704
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00264 K01537 - gmx:100792952 1983.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu10g00264 10 4765764 4771785 Lapu10g00264 10 4765764 4771785 ECH