Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00260 ATGAATTCTGGTGCTGTCTTGACACTGCCTCCTGTGAGCAATGTATTCGGGACTAGGGAGCCTCAGGATTTTGAGGACGAGTTTGCGGAGAAAGATCCAACCGGACGGTATACAAGGTACACTGAAATCTTGGGAAGGGGTGCCTTCAAAACTGTTTATAGGGGCTTCGATGAAGTTGATGGAATTGAAGTTGCTTGGAACCAAGTTAAGATTGACGGCCTCTTGCATTCACTAGATGATCTTGCGAAATTGTATTCTGAAGTTAATCTATTGAAGTCTTTGAACCATGACAATATCATTAAGTTCTATGATTCTTGGATTGATGATAAGAAGAAAACTGTCAACATGATTACTGAACTCTTCACATCAGGAAATTTAAGGCAATATCGCAAAAAGCATAAATATGTTGAAATGAAAGCTATAAAAGGTTGGGCCAGGCAGATTCTTCACGGCTTACTATATCTTCACAGTCACAGGCCACCCATTATTCATAGAGACTTGAAATGTGACAACATTTTTGTGAATGGAAACCAGGGTGAAGTTAAGATAGGGGACCTTGGTTTGGCAATTGTCATGCAACAACCAACCGCCCGAAGTGTTATTGGGACTCCTGAGTTTATGGCTCCAGAACTGTATGAAGAGTCATACACAGAACTGGTTGACATCTATTCTTTTGGGATGTGCATATTGGAGATGGTTACTCTTGAGTATCCCTACGCCGAATGCAAAAATCCAGCTCAAATCTTTAAGAAAGTTACCTCAGGAATCAAACCCGCTTCCCTTAACAAGGTGAGCGATCCTCAAATTAAGGAGTTTATTGAGAAATGTTTGGTTCCAGCATCTGAGAGATTGTCAGCAGAGGAGCTTCTGAAAGACCCGTTTCTACAAGTTGAGAATTCAAAGGATCCCGTCCTTTATCCTGTACAACCACCTAGAAGAGCTCTGAGAGCATATTCATTCAAGTCTGGTTCTCAATCTATGGACTTGGATGGTGACTACAAACAGTTTTCTATGAGTATCTGTTCTGAAAGCAACCAGGAAAGCCCATATTGTCCTGTTTTTGAAGTACAGAGGGCAAATAATAACAATGAGTTTAGGTTGAAAGGGACTATAAATGATGATAACTCGGTATCATTGACCTTGCGCATTGCTGATACATGTGCAGGTCGAGTAAGGAATATACATTTTCTCTTTTACCTTGATTCAGATACCGCAGTCTCTGTGGCCACAGAGATGGTTGAACATTTGGAGTTGGCAGATCACGATGTACCTTTCATAGCTGGGCTTATTGATTACTTGATAATGAAAATTCTCCCTTGGTGGAAGCCTTCGCATGATCGCTGCTCCTGTGGAGAAATAAATCCTAATATAGATTCCCAAAGCTTCATGGGATGGCCATGGGGTTCTGTCCTACCAAGTATTCCCTCTGATTTGGTTATCGGGGATACAACCCTCAAAGAAGATTGTGTAGCCGCCGAGAAGAGCAGCTATATGAAAAATGCTGATAAAGCTACTTTTGAGGGGGATTATTGTTCACAAGGATCTGAAGTTTCTGAGGTAGTTGTTGAAAATGCTTCTATGAAAGATGCCAATTATCATGGTTACAATGTTGATGCAAGTTCTAAATGCTTAAGTAGTAGGTCCATCTCTGAATTTGAGCTTGGGGATGCATATTTTGAGGACTGTAAATTGCAACAAGAAAATTATTGTGCTGGGGAAGAAGTTGTGATAAATGAATACCCAAAGAACTCAGGGTCAGTTCTTGGAACATCTACTAATGTTGGGAGCCCAAGAAGTAGCTCTTCTTGTGTGTCTTCAACAGTAGAGGAGGTTGATCTTGAGCTACAGTTGGAACTTGCTGTAATTGAGTCTCACTATCAGCATTGGATTGATGAACTTAACAAAATGAAGTTGGAGGCACTGGAATCCACCAGAAGGAGATGGATTGCTAAGAAGAAACTGGCTGTTCGGTGA 1974 0.4108 MNSGAVLTLPPVSNVFGTREPQDFEDEFAEKDPTGRYTRYTEILGRGAFKTVYRGFDEVDGIEVAWNQVKIDGLLHSLDDLAKLYSEVNLLKSLNHDNIIKFYDSWIDDKKKTVNMITELFTSGNLRQYRKKHKYVEMKAIKGWARQILHGLLYLHSHRPPIIHRDLKCDNIFVNGNQGEVKIGDLGLAIVMQQPTARSVIGTPEFMAPELYEESYTELVDIYSFGMCILEMVTLEYPYAECKNPAQIFKKVTSGIKPASLNKVSDPQIKEFIEKCLVPASERLSAEELLKDPFLQVENSKDPVLYPVQPPRRALRAYSFKSGSQSMDLDGDYKQFSMSICSESNQESPYCPVFEVQRANNNNEFRLKGTINDDNSVSLTLRIADTCAGRVRNIHFLFYLDSDTAVSVATEMVEHLELADHDVPFIAGLIDYLIMKILPWWKPSHDRCSCGEINPNIDSQSFMGWPWGSVLPSIPSDLVIGDTTLKEDCVAAEKSSYMKNADKATFEGDYCSQGSEVSEVVVENASMKDANYHGYNVDASSKCLSSRSISEFELGDAYFEDCKLQQENYCAGEEVVINEYPKNSGSVLGTSTNVGSPRSSSSCVSSTVEEVDLELQLELAVIESHYQHWIDELNKMKLEALESTRRRWIAKKKLAVR* 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00260 657 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 23 515 - -
Lapu10g00260 657 SUPERFAMILY Protein kinase-like (PK-like) 40 351 IPR011009 -
Lapu10g00260 657 Pfam Protein kinase domain 41 295 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu10g00260 657 SMART serkin_6 38 295 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu10g00260 657 CDD STKc_WNK 36 295 - -
Lapu10g00260 657 ProSiteProfiles Protein kinase domain profile. 38 295 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu10g00260 657 FunFam probable serine/threonine-protein kinase WNK9 121 300 - -
Lapu10g00260 657 ProSitePatterns Serine/Threonine protein kinases active-site signature. 162 174 IPR008271 GO:0004672|GO:0006468
Lapu10g00260 657 Gene3D Transferase(Phosphotransferase) domain 1 121 301 - -
Lapu10g00260 657 Gene3D Phosphorylase Kinase; domain 1 22 119 - -
Lapu10g00260 657 FunFam Probable serine/threonine-protein kinase WNK1 23 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00260 Lapu-Chr10 4743985 4748141 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00260 25 445 MAP Kinase Kinase Kinase AT5G41990 60.140 8.91e-171 498
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Lapu10g00260 Pkinase 2.9e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00260 K08867 - gmx:100809602 1062.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu10g00260 10 4743985 4748141 Lapu10g00260 10 4743985 4748141 ECH