Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00238 ATGCTCTTCATCATGCGTGGAACACTTGCAACTGCCACAACAAATGGTGGAAGAACTGGTTTCTTCAACTCCTTTGAGATCAAGGCTGGTGACTTCTGTGGGGAAGAGCTTCTAACATGGGCCTTGGATCCCAACTACTCCTCAAATCTACCCATTTCAACCAGAACTGTGGAAACTATATCAGAAGTTGAAGCCTTTGCTCTCATGCCTGAAGATTTGAAATGTGTTGCTTCCCAATTTCGACGTCTTATAAACAACAAACAACTCCAACACACTTTCAGGTTCTATTCCTTGCAATGGAGGACATGGGGTGCATGTTTCATACAAGCAGCATGGCGTAGATACAGAAAAAAGAAGGCAGAGAGGTTGTTACGTGAAGCAGAAGAAAGGATACAAAATCTGGAAAATGAGGAAGGGTCCTCACCTAGCTTTGCTGCCACTGTATATGCATCAAAGTTTGCATCAAATGCATTGCGCCACCTGCGAAGTGGTAAACGCACCAGAGTGCCGCAGCCACAGAGATTGCTTCCCCTGATGCCTCAGAAGCCTTCTGAGCCAGATTTCACTGCTCAGAAAAACTATGTGTAA 588 0.4507 MLFIMRGTLATATTNGGRTGFFNSFEIKAGDFCGEELLTWALDPNYSSNLPISTRTVETISEVEAFALMPEDLKCVASQFRRLINNKQLQHTFRFYSLQWRTWGACFIQAAWRRYRKKKAERLLREAEERIQNLENEEGSSPSFAATVYASKFASNALRHLRSGKRTRVPQPQRLLPLMPQKPSEPDFTAQKNYV* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00238 195 MobiDBLite consensus disorder prediction 162 195 - -
Lapu10g00238 195 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 1 188 - -
Lapu10g00238 195 Gene3D Jelly Rolls 1 82 IPR014710 -
Lapu10g00238 195 Coils Coil 117 140 - -
Lapu10g00238 195 SUPERFAMILY cAMP-binding domain-like 1 82 IPR018490 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00238 Lapu-Chr10 4401230 4406965 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00238 1 189 Ion Channels AT4G01010 63.212 2.01e-76 240
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00238 K05391 - gmx:100795201 315.849
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g01943 6 19288937 19292565 Lapu10g00238 10 4401230 4406965 PCT