Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00237 ATGACTGCAAAGGGAGAGAGGTTTGTCAGGTTTAAGGATTGGAAGTCACTTTCATCTTCAAGTATTGAGCACAATGATTCAACTAGTGACGGATTTCAAAAAAGAAAAGTTCAATCAAGCCAAAGTTCTGTCAGTGATGAATCAATAAGAAATTTGTCTTGTAGGAGGCATGTTCTTCATCCACAGGGGCCAACACTTCAAAAATGGAACAAAATTTTTGTAATCACTAGTGTGATGGCAATCTATGTTGACCCACTTTTCTTTTACATCCCAGTGATTGATGACGATAAAAAATGCCTTGATTTGGATGGAACATTGAAGATTACTGCCAGTGTTCTTCGCTCATTCTTTGATCTTTTCTACATTCTTCACATTATCTTTCAGTTTCGAACCGGGTTTATTGCACCTTCCTCTCGTGTGTTTGGAAGGGGTGAGCTTGTTGATGACCCTTCTGCCATAGTGATGAAATACTTGTGTTCTTACTTCAGCATTGACATTCTATCAATTATTCCACTTCCTCAGATGGTCATTTTAGCTATGCTCTTATTCCCAACATGCTCAGTTCCTTACGTGGGAAAGGATTTGCTGAAGTATACAGTAATAGCCCAGTACGTGCCAAGACTTCTGCGGATTTACCCTTTATTCAAAGAAGTAACAAGCACTTCTGGCATATTGACTGAGACAGCATGGGCTGGAGCAGCTTACAATCTTTTTCTCTACATGCTAGCAAGTCATGTGGTTGGAGCTTTCTGGTATCTGTTTTCAGTAGAATCAAGGATGAGGTGCTGGCGCAGGCAGTTGAAGAATAATACTACTTTCTTTCATGAATCCTACCTTAGCTGTGGGTCTGACAATTCTACTGTTCAATCACTTCTCAGTCATTCGTGCCCTATCACTGATCCACAAACCATTGGAGACCTTGAAGCTTTCAATTTTGGAATATTCATAGAAGCTCTAAAGTCTCGAGTGGTAGAACCAACAACTGATTTTCATCACAAGTTCTTCTACTGCTTTTGGTGGGGTTTGCGCAGTTTAAGTTCAGTTGGGCAAGGTCTCGAGACAAGTACTTATGTTGGGGAGATAATCTTTGCTATCTCCATTGCTGTCTCTGGATTGGTTCTATTTGCATCACTTATTGGAAACATGCAGAAATATCTACAATCCACCACTGTCAGAGTTGAAGAGATGAGAATCAAAAGGAGGGATGCAGAATTGTGGATGTCCCACCGTATGCTACCTGATTTCCTGAAGCAAAGGATTAGACGGTATGAACAATACAAATGGCAAGAAAATAGGGGTGTTGAGGAGGAGAAATTAATTCGCAACCTCCCCAAAGATCTCAGAAGGGACATAAAGCGCCATCTTTGCTTAGATCTAGTTAAAAAAGTGCCAATGTTTGAGAGCATGGATAATCAGTTGTTGGATGCACTGTGTGATAGACTGAAGCCAGTCCTGTACACAGAAAAGTTACATAGTTCGTGA 1482 0.4055 MTAKGERFVRFKDWKSLSSSSIEHNDSTSDGFQKRKVQSSQSSVSDESIRNLSCRRHVLHPQGPTLQKWNKIFVITSVMAIYVDPLFFYIPVIDDDKKCLDLDGTLKITASVLRSFFDLFYILHIIFQFRTGFIAPSSRVFGRGELVDDPSAIVMKYLCSYFSIDILSIIPLPQMVILAMLLFPTCSVPYVGKDLLKYTVIAQYVPRLLRIYPLFKEVTSTSGILTETAWAGAAYNLFLYMLASHVVGAFWYLFSVESRMRCWRRQLKNNTTFFHESYLSCGSDNSTVQSLLSHSCPITDPQTIGDLEAFNFGIFIEALKSRVVEPTTDFHHKFFYCFWWGLRSLSSVGQGLETSTYVGEIIFAISIAVSGLVLFASLIGNMQKYLQSTTVRVEEMRIKRRDAELWMSHRMLPDFLKQRIRRYEQYKWQENRGVEEEKLIRNLPKDLRRDIKRHLCLDLVKKVPMFESMDNQLLDALCDRLKPVLYTEKLHSS* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00237 493 MobiDBLite consensus disorder prediction 20 48 - -
Lapu10g00237 493 Gene3D - 71 389 - -
Lapu10g00237 493 SUPERFAMILY cAMP-binding domain-like 394 487 IPR018490 -
Lapu10g00237 493 Pfam Ion transport protein 69 393 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Lapu10g00237 493 SUPERFAMILY Voltage-gated potassium channels 60 387 - -
Lapu10g00237 493 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 36 489 - -
Lapu10g00237 493 MobiDBLite consensus disorder prediction 17 48 - -
Lapu10g00237 493 FunFam Cyclic nucleotide-gated ion channel 1 392 456 - -
Lapu10g00237 493 Gene3D Helix hairpin bin 392 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00237 Lapu-Chr10 4401230 4406965 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00237 9 492 Ion Channels AT4G01010 58.449 0.0 607
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00237 K05391 - gmx:100795201 857.055