Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00218 ATGGAACAATTTAGGCAAGTTGGGGAGGCACTCGGGGGTTTGAAGTCTGTGATGGTATTCCGGGAGAACATTCAAATCAATAATAGGCAATGTTCTCTGCTGCTTGATGTGTTCAGCTTTGCGTATGAGTGTATTGCAGATGAGATTATACAGAACCTGCAATTTGAAGAGAAGAGTGTGAAGTGGAAGATTCTTGAACAACCCTTGAGAGAGATCCATAAGATTTTCAGAGAAGGTGAAACTTACATTAGGCATTGCATGGAAACAAAGGACTGGTGGGCAAAAGTCATTACCTTATGCCACAACACAGATTGTGTTGAGTTTCATATACACAATTTGCTTTGTTGCATGCCAGTTGTAATTGAAGCTATTGAGTCTGCAGGAGAAACATCAGGGTTGGATCAAGAGGAGAGGCAAAGGAAGAGGCACATCAACTCTAACAAATACAGGAAAGAGTATAGAGACATGAAGCTTTTCCAGTGGAAATTTGGGAAGCAGTACCTCATCACTCAGGACTTATGCCACCGTTATAATACTGTTTGGAAGGAAGATAGATGGTTCCTTTACAACAGACTCCATGAAAAGAAAGTGAAAGGTGTAACAAAGTTTGAGAAGAAATTGATAGATTTGCTTTTGAGGAATTTGGAAAGATCAGAATCACTAGCAGGGAGTCTCCTTCCAAGCTCAATATTGGTTGGGTCCAAGGACTTCCAGGTAAGGAGAAGAATGGGGAACGCGAGTCAGTACAAGGAGATTTCATGGTTAGGTGAAAGCTTTGTCATAAGACATTTCACTGGGGACATTGAAGCATTGCAACCTGAGATCATAGAACTTTTATCTCTTTCCCATCCAAATATAATGGACTGCCTTTGTGGTTTTACTGATGAAGAGAAGAAAGAATGCTTCTTGCTAATGGAACTCATGAGCAAAACCCTTTCCACCCACATTAAAGAGATTCACGGTCCACGGAGGCGAATACCATTCTTGCTTCATGTGGCAGTTGATCTTATGCTTCAGATTGCCAGGGGAATGGAGTATTTGCATTCAAAGAAATTATATCACGGAGAACTAAACCCTTCAAGCATTCTTGTTAAGGTTAGAGGTACATCCCCAGAGGGTTACTTGCATGCCAAGGTAACTGGATTTGGACTAAATTCTGTCAAGGATTTGAATCAGAAAGTGAACACAAATCAGAATGGAACTCCCCCATTCATCTGGTACTCTCCTGAAGTACTTGAAGAGCAGGAACAGTCAGGAGGTGCATCAAACTCCAAGTACACAGAGAAATCTGACGTGTACAGTTTTGGAATGGTTTGCTTTGAACTTCTAACTGGCAAAGTCCCTTTTGAAGATAGTCATCTCCAAGGAGAGAAAATGAGCAGGAACATAAGGGCAGGAGAGAGGCCACTTTTCCCACTAAATTCACCCAAATATGTTATTAACTTGACAAAAAGATGTTGGCATGTTGACCCACATCAACGTCCAAGCTTCTCTACCATATGTAGAGTTCTTCGTTATATAAAAAGATTTCTTGCAATGAATCCTGGTTACAGTAGTCAGCCAGAACCACCAGTGCCACCGGTAGATTACTGTGATGTAGAGTCAGTGCTTCTGAGGAAGTTTCCTTCATGGGGAAATTCTGAATCAGCACCAGTATCAATCATCCCATTTCAAATGTTTGCCTATCAAGTTATAGAGCGAGAAAAAATAACTACCTACTGTAAGGATAACTCTGAGTCTGGAAGTGATGCTTCAGCCTGTGGTGAAGAACTTGTTACATCAGGGGACGAGCCATTTCCATCCACAGCTGAAAGGAAGTCTTTGCTTGGACATGAAATTATGAACAGAAAGATTACTTTGACAAGGAAATCTCTTGATTTGAAGCTCACCAAACAATCAGGTACACCGAAAGGGAGATCAGCCAGACCTCCACAAATGTCCCCTCGTGCAAGAAGTATGAGGATTACTTCAGAGAACCTTATATCAAGTCCAAGGACAATAAGAAGAGTATCTTCTGGTCATGTCTCAGACTCTGAGCTTTCTTAG 2046 0.414 MEQFRQVGEALGGLKSVMVFRENIQINNRQCSLLLDVFSFAYECIADEIIQNLQFEEKSVKWKILEQPLREIHKIFREGETYIRHCMETKDWWAKVITLCHNTDCVEFHIHNLLCCMPVVIEAIESAGETSGLDQEERQRKRHINSNKYRKEYRDMKLFQWKFGKQYLITQDLCHRYNTVWKEDRWFLYNRLHEKKVKGVTKFEKKLIDLLLRNLERSESLAGSLLPSSILVGSKDFQVRRRMGNASQYKEISWLGESFVIRHFTGDIEALQPEIIELLSLSHPNIMDCLCGFTDEEKKECFLLMELMSKTLSTHIKEIHGPRRRIPFLLHVAVDLMLQIARGMEYLHSKKLYHGELNPSSILVKVRGTSPEGYLHAKVTGFGLNSVKDLNQKVNTNQNGTPPFIWYSPEVLEEQEQSGGASNSKYTEKSDVYSFGMVCFELLTGKVPFEDSHLQGEKMSRNIRAGERPLFPLNSPKYVINLTKRCWHVDPHQRPSFSTICRVLRYIKRFLAMNPGYSSQPEPPVPPVDYCDVESVLLRKFPSWGNSESAPVSIIPFQMFAYQVIEREKITTYCKDNSESGSDASACGEELVTSGDEPFPSTAERKSLLGHEIMNRKITLTRKSLDLKLTKQSGTPKGRSARPPQMSPRARSMRITSENLISSPRTIRRVSSGHVSDSELS* 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00218 681 Gene3D Transferase(Phosphotransferase) domain 1 254 514 - -
Lapu10g00218 681 MobiDBLite consensus disorder prediction 650 681 - -
Lapu10g00218 681 MobiDBLite consensus disorder prediction 624 681 - -
Lapu10g00218 681 Pfam Protein tyrosine and serine/threonine kinase 269 503 IPR001245 GO:0004672|GO:0006468
Lapu10g00218 681 MobiDBLite consensus disorder prediction 576 601 - -
Lapu10g00218 681 ProSiteProfiles Protein kinase domain profile. 226 511 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu10g00218 681 PANTHER SERINE-THREONINE PROTEIN KINASE 261 509 - -
Lapu10g00218 681 Pfam Protein of unknown function (DUF1221) 21 234 IPR010632 -
Lapu10g00218 681 MobiDBLite consensus disorder prediction 625 640 - -
Lapu10g00218 681 SUPERFAMILY Protein kinase-like (PK-like) 265 532 IPR011009 -
Lapu10g00218 681 FunFam Kinase family protein 234 517 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00218 Lapu-Chr10 4120481 4123531 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00218 274 504 MAP Kinase Kinase Kinase AT5G58950 29.060 2.44e-23 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_Gdt Lapu10g00218 PK_Tyr_Ser-Thr 4e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00218 - - gmx:100813704 1238.79