Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00186 ATGGCTAAAAAGTTAAAAGCAACTTATGAGATGAGTGAGCTTATAAAAGAAAGGGTCACTGGAGAGGATTACTCAGTTGAACCTGCTGATACCAGGAGGCCATTCCGTGCTCTCCTTGATGTTGGTCTTATCAAGACTACAACAGGAAATCGTGTCTTTGGCGCCCTTAAGGGAGCTTTGGATGGGGGTTTGGATATCCCTCACAGTGACAAAAGGTTTGCTGGATTTAATAAGGATAAGAAGGAGCTTGATGCTGATGTTCAGTACTTTTAA 273 0.4249 MAKKLKATYEMSELIKERVTGEDYSVEPADTRRPFRALLDVGLIKTTTGNRVFGALKGALDGGLDIPHSDKRFAGFNKDKKELDADVQYF* 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00186 90 Gene3D - 1 89 - -
Lapu10g00186 90 PRINTS Ribosomal protein L5 signature 58 77 IPR005485 GO:0003735|GO:0005840|GO:0006412|GO:0008097
Lapu10g00186 90 PRINTS Ribosomal protein L5 signature 38 57 IPR005485 GO:0003735|GO:0005840|GO:0006412|GO:0008097
Lapu10g00186 90 PANTHER RIBOSOMAL PROTEIN L5-RELATED 5 88 IPR005485 GO:0003735|GO:0005840|GO:0006412|GO:0008097
Lapu10g00186 90 Pfam Ribosomal large subunit proteins 60S L5, and 50S L18 2 69 IPR005485 GO:0003735|GO:0005840|GO:0006412|GO:0008097
Lapu10g00186 90 SUPERFAMILY Translational machinery components 29 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00186 Lapu-Chr10 3758120 3758718 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00186 20 88 Cytoplasmic Ribosomal Protein Gene Family AT5G39740 84.058 3.49e-39 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00186 K02932 - gmx:100805868 129.413