Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00170 ATGATGCAAAACCCTTTGGAACCTCAAGCCTTGCATGATGACATTGACTGGGTTAACCTTTTCTCTGGCCAAAACAATTTCCTTGGGGATGCCAAGGCCACGATGGAATACGCCTCTTCTTCTTCTTCTTCTTCATGCTCGTCTTCGTCATCCTTATCCTGTGCCTTGATTCCAGAAAATGGTGCTCACATGGATGAAAAGAATGATAAAGAGAAAAGGAAAGGAGGCAGAACGAAGAAGACAACCCGACCCAGGTTTGCGTTTCAGACTAGAAGTGCAGATGATATTCTGGATGATGGTTATCGTTGGAGGAAGTATGGGCAGAAAGCTGTGAAGAACAACATGCATCCCAGAAGCTACTACCGTTGCACGCATCATACATGCAATGTGAAGAAACAGGTGCAAAGGTTATCTAAAGACACAAGCATCGTAGTGACCACTTACGAGGGAATTCACAATCATCCATGCGAGAAGCTCATGGAAACCCTAACACCACTTCTGAAGCAAATGCAGTTTCTCTCTAGATTAGGTTCCAATAGTAACGCTTCTCCTGCTTCTCTGCTATAG 567 0.4444 MMQNPLEPQALHDDIDWVNLFSGQNNFLGDAKATMEYASSSSSSSCSSSSSLSCALIPENGAHMDEKNDKEKRKGGRTKKTTRPRFAFQTRSADDILDDGYRWRKYGQKAVKNNMHPRSYYRCTHHTCNVKKQVQRLSKDTSIVVTTYEGIHNHPCEKLMETLTPLLKQMQFLSRLGSNSNASPASLL* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00170 188 SUPERFAMILY WRKY DNA-binding domain 90 156 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu10g00170 188 SMART WRKY_cls 97 156 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu10g00170 188 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 40 159 IPR044810 GO:0003700
Lapu10g00170 188 Gene3D WRKY domain 82 156 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu10g00170 188 MobiDBLite consensus disorder prediction 59 83 - -
Lapu10g00170 188 FunFam WRKY transcription factor 57 83 157 - -
Lapu10g00170 188 ProSiteProfiles WRKY domain profile. 92 157 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu10g00170 188 Pfam WRKY DNA -binding domain 98 155 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00170 Lapu-Chr10 3552608 3556301 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00170 72 176 WRKY Transcription Factor Family AT1G64000 77.143 2.61e-58 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lapu10g00170 WRKY 2e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00170 - - gmx:100810669 275.789