Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00157 ATGTCAGTATACGACGCAGCTTTCGTTGACACAGAGCTTTCCAAACGCACTTCCATCTTCGGCCTCCGTCTCTGGGTTGTCATCGGCATCCTCGTCGGATCCCTCATCGTCATCGTCCTCTTTCTCCTCTCCCTCTGCCTCACCTTCCGCCGCCGCCACCACCATAAAACCCCCCTCCGCCGCCGCTCCGCCGCCGTCCCAACGCCACCTATCTCCAAAGAAATCCTAGAGATCGTTCACGTTCCCCCGCCGCCCGACACCGTCAACCTCCCGCCTCCGAAGGCGGAGCCCCGCGCCGCCGCCGTACTGTATTCCAGTGGGGAGAGTAGGGGAGCCGTGAGCGTGTGCGAAACGGCGTCGTCACTGGGGAGCGGGAGTGTGGGCCCCGAAGTGTCGCATCTCGGGTGGGGCAGGTGGTACACGCTGAGGGAACTCGAAGCTGCGACTAATGGGTTGTGTGAAGAGAACGTGATTGGTGAAGGTGGCTATGGAATCGTGTATCGTGGGTTGTTACCTGATGGTAACAAGGTTGCTGTCAAGAACCTTTTGAATAATAATGGCCAAGCTGAGAGAGAATTTAAAGTAGAGGTAGAAGCAATTGGTCGTGTGCGGCATAAAAATCTTGTTAGGTTGCTTGGATACTGTGTTGAGGGGGCGTACAGGATGCTTGTATATGAATATGTTGACAATGGGAATCTAGAACAGTGGCTACACGGGGATGTTGGAACTGTAAGCCCTATAACTTGGGATGTCCGAATGAACATTATATTGGGCACTGCAAAAGGATTGGCCTATCTTCATGAGGGTCTTGAACCAAAAGTTGTCCATCGAGACGTGAAATCGAGCAACATACTGCTTGATCGCCAATGGAACCCAAAGGTTTCTGATTTTGGGCTGGCGAAGCTTTTGTCTGCTGAACATAGTTATGTCACTACTCGAGTGATGGGGACCTTTGGTTATGTTGCACCTGAGTATGCCTGCACTGGAATGCTGACTGAGAAGAGTGATGTGTATAGTTTTGGGATACTTATCATGGAAATAATTACCGGAAGAAGTCCTGTTGATTATAGTAGACCACAAGTAGAGGTTAAATTGATAGAGTGGCTGAAAAGTATGGTTGGGAATAGAAAATCTGAGGAAGTAGTTGATCCTAAGCTTGCTGACAAGCCATCTTCAAGAGCTCTTAAACGGGCTCTTTTGGTTGCTCTTCGATGTGTGGACCCTGATGCTGCAAAGAGGCCTAAAATAGGACATGTTATCCACATGCTCGAGGCTGAGGACCTCTTATTCCGTGATGAACGAAGGGTTGAGGGTGAATCTTCCCGTTCCCATCGTGATTATCAACTGGAGCATAAGGGATCAGGATTAGATAAAAGGCAGACAGGTGGAGAGATCAACGATCAAAGTGAAGATGACAGTACTAGTAGTAGATATCACCATCAGCCTACTAGATGGAGATAA 1461 0.4962 MSVYDAAFVDTELSKRTSIFGLRLWVVIGILVGSLIVIVLFLLSLCLTFRRRHHHKTPLRRRSAAVPTPPISKEILEIVHVPPPPDTVNLPPPKAEPRAAAVLYSSGESRGAVSVCETASSLGSGSVGPEVSHLGWGRWYTLRELEAATNGLCEENVIGEGGYGIVYRGLLPDGNKVAVKNLLNNNGQAEREFKVEVEAIGRVRHKNLVRLLGYCVEGAYRMLVYEYVDNGNLEQWLHGDVGTVSPITWDVRMNIILGTAKGLAYLHEGLEPKVVHRDVKSSNILLDRQWNPKVSDFGLAKLLSAEHSYVTTRVMGTFGYVAPEYACTGMLTEKSDVYSFGILIMEIITGRSPVDYSRPQVEVKLIEWLKSMVGNRKSEEVVDPKLADKPSSRALKRALLVALRCVDPDAAKRPKIGHVIHMLEAEDLLFRDERRVEGESSRSHRDYQLEHKGSGLDKRQTGGEINDQSEDDSTSSRYHHQPTRWR* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00157 486 MobiDBLite consensus disorder prediction 439 479 - -
Lapu10g00157 486 MobiDBLite consensus disorder prediction 439 486 - -
Lapu10g00157 486 ProSitePatterns Protein kinases ATP-binding region signature. 158 180 IPR017441 GO:0005524
Lapu10g00157 486 CDD STKc_IRAK 158 424 - -
Lapu10g00157 486 ProSitePatterns Serine/Threonine protein kinases active-site signature. 274 286 IPR008271 GO:0004672|GO:0006468
Lapu10g00157 486 FunFam Probable serine/threonine-protein kinase At1g01540 132 227 - -
Lapu10g00157 486 SUPERFAMILY Protein kinase-like (PK-like) 130 424 IPR011009 -
Lapu10g00157 486 ProSiteProfiles Protein kinase domain profile. 152 429 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu10g00157 486 PANTHER OS01G0323000 PROTEIN 8 444 - -
Lapu10g00157 486 CDD TM_EGFR-like 27 56 - -
Lapu10g00157 486 FunFam Putative receptor-like serine/threonine-protein kinase 228 438 - -
Lapu10g00157 486 SMART serkin_6 152 430 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu10g00157 486 Pfam Protein kinase domain 155 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu10g00157 486 Gene3D Phosphorylase Kinase; domain 1 133 227 - -
Lapu10g00157 486 Gene3D Transferase(Phosphotransferase) domain 1 228 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00157 Lapu-Chr10 3342989 3346537 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00157 121 424 Receptor kinase-like Gene Family AT4G02010 45.455 3.86e-91 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Lapu10g00157 Pkinase 5.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00157 - - gmx:100777348 803.127