Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00134 ATGTTCCTCTCTTTTGTTCTCTTCATTCTCATTCTCCAGACTTCCACCTCCGCCACCATCATTCTCCAAGGAAACACTACTCTGCAAAGCCCCAACAACACTTTCCAACTTGGCTTCTTCAATTTCTTCCCTGGCCCGGGCCCGGGCCCGCCCAAATTCTACCTCGCCATCCGCCGCACCTCCTTCCCCGACCCCAACACCATCTGGGTCGCCAACCGCCTCCACCCCTCCCCCTCCCTAACTGCTTCAACCCTCCAACTAACCTCAGCCGGTCAATTACTTATGACCCACTTCAACACCACTATCTGGACCGCCACCGCTGCCGCCGCCACCGCCACCAACTTCACCCTCAAGCTTCTCGAATCCGGAAACCTCGTCCTCCTCACTTCTGACGGCGTCGTTTCATGGCAGAGCTTCGATTCCCCCTCTGACACGTGGCTCCCCGGCATGAACCTCACGCGCTTCAACTCCCTCACCTCTTGGCGCACGGATACGGACCCTTCCCCTGGGCTTTACTCCCTGCGGTTGAAGCCATCCTTCTACGGCGAGTTCGAGCTCGTCTTCAATGACACCGTTTCGTACTGGTCCACCGGGAACTGGAGCAATGGGACATTCCTCAACGTCCCCGAGATGACCGTCCCCTACCTCTACACCTTCCATTTCACCGCGCCGTTCTCCCCCGCCGCGGCCTTCGGCTTCTCCGATCGCCCCTTCGAGACGGGCATCCATGTTCCGTCGATGTTCCGCGTGGAGCCCTTCGGGCAGGTGAAGCAGTACACGTGGAACAGCCAGGGGGGGTCCTGGCAGATGTTTTGGTTCAAGCCGGAGAATGTGTGCCAGGTTCGGGGACTCTGCGGGGGGTTCGGAGTTTGCACTGGGGAAACATCCAAATTGTGTGAGTGTGTGAGTGGGTTTGAGCCTTTGGATGGTCATGGGTGGGGTTCTGGTGATTACTCTGAAGGTTGTCACCGTGCGTACGCGGGGTGTGATGGGGGTGATGGGTTTGAAGATCTTGGTGCTGTGAGGTTTGGATTTGGGAATGTGAGTCAGGTTGAGAGGAAATCTAGAAGCTTTTGCGAGCGCGAGTGTTTGGGTGATTGTGGGTGCGTTGGGTTGAGTTTCGACGAGCAGAGTGGGGTGTGTAAGAATTTTTATGGGTCGCTTTTCGATTTTCAGAATTTAACCGCCGATGGTGAGAGTGGGGTTTTGTATGTTAGGGTTCCGGGAGGGGGATCTGGGAGGAAGGGGTTTGATAGGAATGTTTTGAGTGGGGTTGTTATTGGGTCGGTTGCGGTTTTGGGGGTGGTGGTGGTGACATTGTTGGTGATGGTGAAGAGGTGGAGTGGGAGAAAGGGGTTGGAGGAGGAGGATGGGTTTGTGCCTGTGTTGAATTTGCGGGTGTTTTCTTACAAGGAACTTCAGTTGGCGACTCGGGGGTTTTCGGAGAAGGTTGGGCATGGAGGGTTTGGGACTGTGTTTCAGGGGGAGTTGAGTGATGCTTCAATTGTGGCTGTAAAGAGGTTGGAGAGGCCAGGGAGTGGCGAGAAGGAGTTCAGGGCTGAGGTCTCCACAATTGGGAATATTCAACATGTGAATCTTGTGAGGCTCAGAGGGTTTTGCTCTGAGAATTCTCATAGGCTTTTGGTTTATGACTACATGCAGAATGGTGCTCTTAGTGTTTATTTGAGGAAGGAAGGGCCTAGTCTAAGTTGGGATGTTAGGTTTAGGGTGGCTGTTGGCACTGCTAAGGGGATTGCTTATTTACATGAGGAGTGTAGGTGTTGCATCATACATTGTGATATCAAGCCAGAGAACATTCTTTTGGATGGTGATTTCACTGCCAAGGTTTCTGATTTTGGGTTAGCAAAGCTCATTGGAAGGGACTTCAGCAGGGTGTTGGCGACTATGAGGGGGACGTGGGGGTATGTTGCTCCGGAGTGGATTTCTGGTGTGGCAATTACAACCAAGGCAGATGTTTACAGCTATGGAATGACGTTGCTGGAGCTGATTGGCGGTCGAAGGAATGTGGAGACACTGCCGTCTGCAGGTGGAGGTGGAGAGAGTGGTACTGAGACTGGAGGGAAGTGGTTCTTCCCACCGTGGGCGGCGCAGCGGATAATAGAAGGAAATGTAGGTGAAGTGATTGATAAGAGACTTGGTAGTGTGTATAATATTGAGGAGGCTAGGAGGGTTGCTTTGGTGGCAATTTGGTGCATTCAAGATGATGAGGAAATGAGACCTACAATGGGTATGGTGGTGAAGATGTTGGAGGGGTTGGTGGAGGTGAGTGTTCCTCCACCTCCCAAGTTGCTTCAAGCGCTGGTTACTGGGGATTCCTTTCATGGAGTCAAGGCTAATTCAGGCAATGGTGTCTCTACTGGTGGAAGCTTATCTGATGGCAACTTGGAAGTGTCAACTGCTGATTCTGAATCTTATACAGGGAATGTTTTCTCTCCATTAGATGTTAATGTCAATGTCAGTGTTCGATAA 2490 0.5241 MFLSFVLFILILQTSTSATIILQGNTTLQSPNNTFQLGFFNFFPGPGPGPPKFYLAIRRTSFPDPNTIWVANRLHPSPSLTASTLQLTSAGQLLMTHFNTTIWTATAAAATATNFTLKLLESGNLVLLTSDGVVSWQSFDSPSDTWLPGMNLTRFNSLTSWRTDTDPSPGLYSLRLKPSFYGEFELVFNDTVSYWSTGNWSNGTFLNVPEMTVPYLYTFHFTAPFSPAAAFGFSDRPFETGIHVPSMFRVEPFGQVKQYTWNSQGGSWQMFWFKPENVCQVRGLCGGFGVCTGETSKLCECVSGFEPLDGHGWGSGDYSEGCHRAYAGCDGGDGFEDLGAVRFGFGNVSQVERKSRSFCERECLGDCGCVGLSFDEQSGVCKNFYGSLFDFQNLTADGESGVLYVRVPGGGSGRKGFDRNVLSGVVIGSVAVLGVVVVTLLVMVKRWSGRKGLEEEDGFVPVLNLRVFSYKELQLATRGFSEKVGHGGFGTVFQGELSDASIVAVKRLERPGSGEKEFRAEVSTIGNIQHVNLVRLRGFCSENSHRLLVYDYMQNGALSVYLRKEGPSLSWDVRFRVAVGTAKGIAYLHEECRCCIIHCDIKPENILLDGDFTAKVSDFGLAKLIGRDFSRVLATMRGTWGYVAPEWISGVAITTKADVYSYGMTLLELIGGRRNVETLPSAGGGGESGTETGGKWFFPPWAAQRIIEGNVGEVIDKRLGSVYNIEEARRVALVAIWCIQDDEEMRPTMGMVVKMLEGLVEVSVPPPPKLLQALVTGDSFHGVKANSGNGVSTGGSLSDGNLEVSTADSESYTGNVFSPLDVNVNVSVR* 830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00134 829 ProSiteProfiles Bulb-type lectin domain profile. 13 140 IPR001480 -
Lapu10g00134 829 Pfam S-locus glycoprotein domain 195 307 IPR000858 GO:0048544
Lapu10g00134 829 SUPERFAMILY Protein kinase-like (PK-like) 459 757 IPR011009 -
Lapu10g00134 829 CDD PAN_AP_plant 329 408 - -
Lapu10g00134 829 Gene3D - 12 139 IPR036426 -
Lapu10g00134 829 FunFam Receptor-like protein kinase 4 441 552 - -
Lapu10g00134 829 Pfam D-mannose binding lectin 67 154 IPR001480 -
Lapu10g00134 829 ProSitePatterns Serine/Threonine protein kinases active-site signature. 596 608 IPR008271 GO:0004672|GO:0006468
Lapu10g00134 829 Gene3D Transferase(Phosphotransferase) domain 1 553 764 - -
Lapu10g00134 829 SMART blect_4 19 142 IPR001480 -
Lapu10g00134 829 ProSiteProfiles PAN/Apple domain profile. 329 407 IPR003609 -
Lapu10g00134 829 Pfam Protein kinase domain 481 675 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu10g00134 829 PIRSF SRK 1 811 IPR024171 GO:0004674
Lapu10g00134 829 FunFam S-receptor-like kinase 5 553 765 - -
Lapu10g00134 829 ProSiteProfiles Protein kinase domain profile. 478 760 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu10g00134 829 SUPERFAMILY alpha-D-mannose-specific plant lectins 53 200 IPR036426 -
Lapu10g00134 829 SMART serkin_6 478 760 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu10g00134 829 Gene3D Phosphorylase Kinase; domain 1 451 552 - -
Lapu10g00134 829 ProSitePatterns Protein kinases ATP-binding region signature. 484 506 IPR017441 GO:0005524
Lapu10g00134 829 PANTHER OS07G0415500 PROTEIN 4 769 - -
Lapu10g00134 829 CDD STKc_IRAK 484 759 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00134 Lapu-Chr10 3082945 3087205 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00134 468 766 Receptor kinase-like Gene Family AT5G20050 46.795 2.24e-82 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Lapu10g00134 Pkinase 2.7e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00134 - - gmx:100778917 1319.68