Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00122 ATGGCAAAGAAGTCCCAAAGACGCCCTGTGCGGTTTGAGAAAGATAAATCAGGCTGCATGTGGGGTTTTATTAGTATGTTTGATTTTCGCCATGGTAATTCCACTAGGAAGATGATTGCAGACAAGAGGCGAAGCAGCAAACATGCTGTTGGGGCCATAAATTCAAAGACCAAGTTCAGGATGTTGAGCAATTTGGATGAAGTTTGTCAAAGCAGTTCTGACACTGGAGAGAGTAGAAGACCAACAGTTGTTGGTGCTGCTAATAAGCCTAGCGTGAAGAAACTCATTGAAGAAGAGATGTTCATTGACCAGAACAAAATGAAGGATTCAGATAGTGCTCAAATAGAATCAAAGGAATCCAAATTAAGGCGTGATGTCCTTTTGAAGTTAGATTCCAAAAGGAAACAAAAATTTTACAAGAAAAACTGTGATAATGACAACAATGATTTAAATTTGGATACAGCCTTGAAATCTGAAATTACACATAATAAGCACTCAAGGAAGCAATCTAAAGATAATCTTGATCTGGATAAGATGATTGCAGAGTTTTGTCATCTAAAAGATGTTTGTTCAATGATGCATGGCAATGATGTAGAAGTAGAAGTTGATGCGAAATCAAACCAGAAGCAAGCTATTTCTGAAAATGCAAAAGAAGCAATTTGTGAATTTGTGAATCAGATGGTATTAAATGGCAAAGATCCGGCTGAAGCCAGAAAATTCCTTTGCTCCCATAAACTTGTGGAAGCGCTCGAGTTTATAAATTCAGATAAGGAATTGTTTCTTTCACTTCTACAAAATCCGAATTCACTTTTGTTGAAATGTGTTCAAGAGTTTAAGAATTCTCAGGGAACAAATGAAAAAGAACATGGTTGTGTAACTGGTTCCAACTTCTCTGGACAAGATCATGGCAACCTGAAACAAAATAGGGATCTAGTCAACCACAAGAAGCACAATTTTTTCAGAAAAAAGGCGAAGTCTCATTCAAAAAGTTCAGCAAATGAAAATGAGAACACTAATTTGTCAAGTATTGTTATTCTGAAGCCTGGGCAGATGGGCTTGCAAAATTCTGAAACTGGAAACAACCGTGCCTCATATCAAGATTCTTATGATGTTGCCAAATACAATGGTCCTTCAGTGAGAGGTAGTTCACATTTTTCTCTCACAGAGATAAAAAAGAAATTAAAGCATGCTATGGGAAGGGAGAGACATGGAAACCCTGAAGAGATTTCAAAAAGACACCCTGCTGCTGAATCTCAAAATAGGAGGCCTAGCAGTAAATTCGTTTGTAAAGACAATGTTGGAATGAGATCTCCTAATAAAGATCACTTCTTCATTGAAAAAATTGGAAGACCTACCACTGGTGTTATGAAAGGAGACAAGACCAGTACAACTAAAGATTTTGAATTGACAGTGGAACATGAAAATGGTAGTTACCCAAAACAAAGGGTTTCTAACTTATATATTGAGGCTAAGAAACATTTATGTGAAATTGTAGGTAATGGAGATGAGAAAATAGACTTGTCAAGTAGGCAGATTTCTCGAACCCTTGGGAAAATACTATCTCTTCCTGAGTACAACTTTTCTCCCCTTGGCAGTCCTAGAAGGGATTGGGAGCATCATTCAGTGACTGAACAGTCAAGATTTTCCACTTCAGATAAAATTTGGATGGCTAATAAGGATAATGTGTCTCCCAAACAAGGATCCTTTGTTGGTTATTTGGATCAGGAAATAAACAATTCAGAGAAGCAGCCAATAATTTGTGACGAAATCTCTAATAACAAAGTACAAGAAATTAAGTCAGACTCAAATTTTGCAGACGACCATAGTCTTATAGATGAATCACAAAAACTTTGTTATGTTAGAGTTGAGATAGTTACTGAAGGCGATGTAGAATCTGCACGAGAGGTGAATGTTTTGGAACCTTCCTCACAACCAGTTGACCTCAGTGCAGGAAAGGAAGACCAAAACTATGGTCTCTCAGAAATTTCTGATTTTGCTAGATGCTCTGAATATTCAAAGCAGGATGTAGAAGAAGAACACAAACCAACATCTCCATTGTCGTCCCCACCTCACTCTTCCACTACCAAAGAAAGTGTTTCAGATGTATCTGGACGGCCAAGTCCAGTATCTGTTCTTGACACATCGTTCTTCGAAGATGATGTTCAGCCTGTTGAAGTACCAGTCCGACCACTGCAATTTAGAGAACAATACTCTTCACCTTTGAATGAAATGAACAGAAAGAAGTATTGTGTTAAAGAAAATGAATGGATATATGATTACATCAAAGCCGTTCTACAAACATCTGGATTGACTATAGACCAATTGTCAATGAAATGTCTTTCCTCAGACAAGATCCTAGATCCTTCCTTGTTTGATCAGGTAGAGTTCTTACCAAACCAGCTTTGCCATGATCAGAAGCTCATTTATGACTGTGTCAATAAAGTTCTCATGGAGGTTTGTCAGAATTATTTTGGGCTCTCTCCTTGTGTCTCATTCATGAAACCTGGCATAAGGCCTTCTCCAGATATGATGAACATTATTCTCAAAGTTTGGGAAGGAGTGTGTTGGCATTTCCTTCCCTTGCCCCCACCCCGTACCTTAGACAAAATTATTAAAAAAGACATGGATAAAAAGGGGACGTGGATGGACCTTAGACTTGAAGCTGAAACCATTGGTTTTGAAATGGAAGAAGCCATTCTTGCAGAACTGATGGAAGATTCAATACTATGTTTTGTAAGCAAAAGTTCAGAAGGTGATTGTTCTCAGCTTCAATTTGAATATAAGGACAATGAAAACACCAAAAATGTGTAA 2811 0.3778 MAKKSQRRPVRFEKDKSGCMWGFISMFDFRHGNSTRKMIADKRRSSKHAVGAINSKTKFRMLSNLDEVCQSSSDTGESRRPTVVGAANKPSVKKLIEEEMFIDQNKMKDSDSAQIESKESKLRRDVLLKLDSKRKQKFYKKNCDNDNNDLNLDTALKSEITHNKHSRKQSKDNLDLDKMIAEFCHLKDVCSMMHGNDVEVEVDAKSNQKQAISENAKEAICEFVNQMVLNGKDPAEARKFLCSHKLVEALEFINSDKELFLSLLQNPNSLLLKCVQEFKNSQGTNEKEHGCVTGSNFSGQDHGNLKQNRDLVNHKKHNFFRKKAKSHSKSSANENENTNLSSIVILKPGQMGLQNSETGNNRASYQDSYDVAKYNGPSVRGSSHFSLTEIKKKLKHAMGRERHGNPEEISKRHPAAESQNRRPSSKFVCKDNVGMRSPNKDHFFIEKIGRPTTGVMKGDKTSTTKDFELTVEHENGSYPKQRVSNLYIEAKKHLCEIVGNGDEKIDLSSRQISRTLGKILSLPEYNFSPLGSPRRDWEHHSVTEQSRFSTSDKIWMANKDNVSPKQGSFVGYLDQEINNSEKQPIICDEISNNKVQEIKSDSNFADDHSLIDESQKLCYVRVEIVTEGDVESAREVNVLEPSSQPVDLSAGKEDQNYGLSEISDFARCSEYSKQDVEEEHKPTSPLSSPPHSSTTKESVSDVSGRPSPVSVLDTSFFEDDVQPVEVPVRPLQFREQYSSPLNEMNRKKYCVKENEWIYDYIKAVLQTSGLTIDQLSMKCLSSDKILDPSLFDQVEFLPNQLCHDQKLIYDCVNKVLMEVCQNYFGLSPCVSFMKPGIRPSPDMMNIILKVWEGVCWHFLPLPPPRTLDKIIKKDMDKKGTWMDLRLEAETIGFEMEEAILAELMEDSILCFVSKSSEGDCSQLQFEYKDNENTKNV* 937
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00122 936 MobiDBLite consensus disorder prediction 671 707 - -
Lapu10g00122 936 MobiDBLite consensus disorder prediction 397 432 - -
Lapu10g00122 936 MobiDBLite consensus disorder prediction 320 339 - -
Lapu10g00122 936 MobiDBLite consensus disorder prediction 685 707 - -
Lapu10g00122 936 PANTHER ADHESIN-LIKE PROTEIN, PUTATIVE (DUF3741)-RELATED 1 911 - -
Lapu10g00122 936 Pfam Domain of unknown function (DUF4378) 759 906 IPR025486 -
Lapu10g00122 936 MobiDBLite consensus disorder prediction 397 419 - -
Lapu10g00122 936 Pfam Protein of unknown function (DUF3741) 225 269 IPR022212 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00122 Lapu-Chr10 2897885 2904197 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00122 1 894 TRM (TON1 Recruiting Motif) Superfamily AT4G00440 32.178 6.24e-104 340
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00122 - - gmx:102667950 1396.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu10g00122 10 2897885 2904197 Lapu10g00122 10 2897885 2904197 ECH
Lapu1g01547 1 28293901 28300768 Lapu10g00122 10 2897885 2904197 PCT