Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00116 ATGGCCAACAAGGGTAATCCAAAGCATGAGAAGATGCAGAAGAACCTAAGCACACAGCTTGCTGTTGCAGTGAGAAGCATTCAATGGAGCTATGGGATTTTCTGGGCACCTTCAACAACTGAAGAAAGGGTACTGGAATGGAGGGAAGGGTACTATAATGGAGACATTAAGACAAGAAAGACAGTTCAAACCATGGAATTGGAAATGAAGGCTGATAAAATAGGCCTGCAGAGGAGTGAACAACTGAAGGAACTGTACAAGTTTCTTCTTGCAGGTGAAGCTGATCCTCAAACCAAAAGGCCTTCTGCTGCATTAGCTCCAGAGGACCTATCAGATTTGGAGTGGTATTACTTGGTTTGCATGTCCTTTGTTTTCAGTCAGAATCAAAGTTTGCCTGGAAGAGCACTGGAAATTAGTGACACAATCTGGTTATGCGATGCTCAACATGCAGATAGTAAAATTTTCTCTCGTTCTTTGCTGGCAAAGAGTGCGTCAATTCAGACCGTGGTGTGTTTTCCCTATCAGAAAGGCGTAATTGAGATAGGCTCAACTGAACTGGTTATCGAGGACCCTAATCTCATTCAACATGTGAAGGCTTGTTTCTTAGAAATCTCAAAGCCTACATGCTCTGATAAATCTTCCTCTGTGCTTGATAAGCCTCATGATGACAAATATCCAACATGTACCAAGGGTGACCACAGGGTGTTAGATACAATGGCTTTGGACAACCCATGTTCCCTTGAAAAAAGAATCAAATTTGATAATGATCTAATCAATGAACTAGAAGGTGATAACAATGAAGATTCTAACATGGATTCTCCTGATAGATGTGAGCATCATTATCCTATGGAATCCATGATTGAGGGTATCAATGGTGTGCCCTCTCAAGTTCATTTTGTGAATGATGCCTTAGTCATTGGTGCTCCTGATTCCCTGAGTTCTTGTGACTGTATGTCTGAAGCTTCTGAGAACCAAGGCAAGGATTCCAAGAATGAAGGCCAAACTCAACTTTTGGAGCTTCAAGATTGCTATAAACCAAAGAGAAGCTTCTTGGATGCTGGAGCTGATGAAGACTTATGCTACATTAGAACACTTTGTGCAATTTTGGGGGACTCAACAACATTTAAAGCAAACCCTTATGCCGGTAACTCGAATTGCAAATCTAGTTTTGCAAAATGGAAGAAAGGGAGAGTTTCTGAAAGGAAGAGGTCAAAGTTTCACCAAAGCATGTTAAAGAAGACTTTGTTTAAGGTCCCCTTTATGCACAGAAGTTACTGTTCTCTGAAGTCACAGAAAGAGAGTGACAGAATGGAATGGACTAGTAAATTGGAAAATGCTGATGATGGTTTCCCGGGGAAAGGTTTCTCTGATAAGAAAAGAGAAATTAAAAACTTTCAGGTTGTCAAATCTTTGGCTCCATCTTCTATAAGTGAGGAGGAGAAGATTTCAATTCTTGGTGACACAATTAATTACTTGAAAAAGCTTGAGACTAGAGTGGAAGAGCTAGAATCTTACATGGCAGTTGCTGATACTGAAGCAAGAACCAGGAGAAAATGCCCTGATGTTCTAGAACAGATGTCGGATAACTATGGCACCAGAAAGATTTGCATGGGAATGAAACCTTGGATGAACAAGAGGAAGGCTAGAGGTATTGATGGGATAGACACAGAGCTGGAAAGAATTGTTTCTGAAGAAGCAAAAGCTTTGGATGTGAAAGTCAATGTGAAGGAGCAGGAGGTTCTGATTGAGATGAAATGTCCTTACAGGGAATACATACTCTATGATATCATGGATACCATAAACAACCTACATTTAGATGCTCACACAGTTGAATCATCAACAAGGGATGGTGTTCTCTCATTGACACTTAAATCTAAGTTTAGAGGAGCAGCAACAGCACCAATGAGGATGATCAAAGAAGCACTCTGGAAAGCATATGGAAATATTTGA 1950 0.4056 MANKGNPKHEKMQKNLSTQLAVAVRSIQWSYGIFWAPSTTEERVLEWREGYYNGDIKTRKTVQTMELEMKADKIGLQRSEQLKELYKFLLAGEADPQTKRPSAALAPEDLSDLEWYYLVCMSFVFSQNQSLPGRALEISDTIWLCDAQHADSKIFSRSLLAKSASIQTVVCFPYQKGVIEIGSTELVIEDPNLIQHVKACFLEISKPTCSDKSSSVLDKPHDDKYPTCTKGDHRVLDTMALDNPCSLEKRIKFDNDLINELEGDNNEDSNMDSPDRCEHHYPMESMIEGINGVPSQVHFVNDALVIGAPDSLSSCDCMSEASENQGKDSKNEGQTQLLELQDCYKPKRSFLDAGADEDLCYIRTLCAILGDSTTFKANPYAGNSNCKSSFAKWKKGRVSERKRSKFHQSMLKKTLFKVPFMHRSYCSLKSQKESDRMEWTSKLENADDGFPGKGFSDKKREIKNFQVVKSLAPSSISEEEKISILGDTINYLKKLETRVEELESYMAVADTEARTRRKCPDVLEQMSDNYGTRKICMGMKPWMNKRKARGIDGIDTELERIVSEEAKALDVKVNVKEQEVLIEMKCPYREYILYDIMDTINNLHLDAHTVESSTRDGVLSLTLKSKFRGAATAPMRMIKEALWKAYGNI* 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00116 649 PANTHER TRANSCRIPTION FACTOR TT8 11 644 - -
Lapu10g00116 649 Coils Coil 492 512 - -
Lapu10g00116 649 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 16 201 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00116 Lapu-Chr10 2820036 2825150 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00116 15 642 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G63650 37.867 5.48e-116 357
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00116 - - gmx:100783746 1150.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu10g00116 10 2820036 2825150 Lapu10g00116 10 2820036 2825150 ECH