Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00091 ATGGATATAGCTTTTAGGTTACCGCAGTCAAATGTGGTATTAGATGGTTTGGATTCTTGCTCTGTATTTGGAGGGAGAGGTTTTGGTTGGGCTTTTCTCGGTAACTTGAGGACTATTCCGAAGGTTCGTTTTAGTGGGATGAACAAGATAGATAGTAGGAATGGTTCGAGAGTAGACTGTTTAGGAGAGTTGAAAGTTTCGAGTGGGAAGAGGAGTTTGTGTTGGAAGAGAAATAAACTTTTTAGGGGGAATAGGAGAATTTGGCCAAAGTGTCAGGGTAACGATTCGTTATCATATGTCAATGGCAATGGACGCAATGTTGATAGGGTGGAAAATGAGGATGAGGACTATGGTTCCAGTGCTGAATCGAGTGAATCTTTGGGAGAAGAAGGGCAAGGAGGGAGGAAAGAAGCTGGGGGTGAAGTTGTGGAGGAACAAGATGTGGATGAATTGAAAGAACTTTTGCAAAAGGCCAAGAAAGAATTGGAAGCGGCTCGAGAAAACAGCATTGTGTTTGAGGAAAAGGTTAAGAAGATATCAGAGACTGCGATTTTTTTGCAAGATGAAGCAGCAAGTGCTTGGAACAATGTTACTTCGACCCTTGATATCATCCAAGATATTGTGGGTCAGGAATTTGTTGCCAAAGAAGCTGTTCAGAAAGCAACTATGGCTCTTTCTCTGGCTGAGGCAAGGCTTCAAGTAGCCATAGAGTCTTTGGAGGTTACAAAAGAAGCTTACGATTCCTCACAAGGTTCTGACAATAGTAATGATGATAAAGATATAAAACAAGAGGAAAAGGAACTTTTGGATGCTCAGGAAGATGTCAAGGAAGGCCAGACAAATTTAGCAAATTGCGAGAATGAGCTGAGATGCTTGCAATGTAGAAAGGAGGAGTTGCAGAATGAAGTGAACAAATTGCATGAAGTTGCAGAACAGTCGCAGCTGAAAGCAGCAAAAGCAGACGAAGATGTTGCAAACATAATGCTTTTAGCGGAGAAAGCTGTTGCCGCCGAAATTGATGCTGCACAACACATGAATGATGCAGAGATTGCATTACAGAAAGCAGACACGTCTGCCTCTAGTTTTAATGCTGATACCAAAGATACTCTACATGTACAAGAGGTTGTAGCTATTCCCGTAGAGGAGGAAGTGGTTCAAGGTTTTTCTGGTGATGATGTCGTTAAAAGAGAGGCTGATTTCTCAATTGAAGATGAGCCTTTGCTTGCCATGCAATCACCCGAAACACAATCTGATAACAATAGGCAAAGTTTGGAAAGCATGGCACAATCTGATTATCTAAGTGATCATGAGAACGGACAATTAAGCTTAGACTCTTCTAAAGAAGCTGAAGTTGAAACAGAGAAGTCAAAGAACGTAGTTCAAACTAAAAAACAGGAAACACAAAAAGATTTGACTAGAGATAATTCATCATTTGCTCCAAAGACATTATTGAAGAAATCTTCCCGATTTTTTCCTGCTTCATTCTTCTCTTTTACTGCCGATGAGACTGATAACACACCTGCATCGGTTTTCCATGGTCTTGTGGAGTCTGCACAGAAGCAACTACCCAAGCTGATTGTTGGGTTATGTTTAATTGGAGCAGGGCTTGTACTCTATACCAATAGAACAGAGAGGGGTGCTCAGCTACTTCAGCAGCCAGAAGTCGTTGCAACCACTGTTGAAGAAGTTTCTTCAACTGCAAAGCCTCTGGTTAGACGGTTCCAGGATCTTCCCAGGAGAATTAAGAAAATTATTGCATCATTACCTAATCAAGAGGTGGATGAGGAGGAAGCCTCCCTCTTTGACATGCTCTGGCTACTCCTTGCAAGTGTTGTATTTGTACCAATATTTCAAAAGATTCCTGGAGGCAGTCCTGTTCTTGGCTACTTGGCTGCTGGTATCTTGATTGGGCCTTATGGCCTCTCCATCATTCGTCATGTACATGGGACAAAAGCAATAGCCGAGTTTGGAGTTGTTTTCCTGTTATTCAATATTGGCCTGGAGCTTTCTGTTGAAAGGCTTAGTTCAATGAAGAAGTATGTCTTTGGATTAGGCTCTGCTCAGGTTTTGGTGACTGCTGTAGTTGTTGGTTTGGTAGCTCATTATATTTGTGGTCAAGCTGGTCCTGCTGCTATTGTCATTGGGAATGGTCTAGCATTATCATCAACTGCTGTTGTTTTGCAAGTGTTACAGGAGAGAGGTGAGAGCACATCGCGACATGGAAGGGCTACATTCTCTGTTTTGCTTTTTCAGGATTTGGCTGTTGTTGTCTTGCTAATACTCATACCTCTAATTTCACCTAATTCTTCCAAAGGAGGGGTTGGTTTTCAAGCCATTGCTGAAGCACTTGGTCTAGCCGCTGTTAAGGCAGTGGTTGCCATTGCAGCCATAATTGCAGGTGGACGATTGCTCCTGCGACCCATATATAAGCAGATTGCAGAGAATCAAAATGCAGAAATATTTTCTGCCAATACACTCTTCGTTATTCTTGGGACTAGCCTTCTCACAGCCAGGGCTGGACTTTCAATGGCATTAGGGGCATTTTTGGCCGGTTTACTACTGGCAGAAACAGAGTTTTCCTTACAGGTTGAATCTGATATTGCCCCATACCGTGGCCTTCTTCTGGGTCTCTTCTTTATGACGGTTGGAATGTCAATTGATCCAAAACTTCTTGTTTCAAACTTTCCAGTCATTACTGGGACCTTGGGACTTTTGATATTTGGCAAGACTTTGTTGGTTTCTTTAATTGGTAGACTATTTGGTATTTCTCTCATTTCTGCTATTAGAGTTGGTCTTCTTCTTGCTCCTGGGGGAGAATTTGCATTTGTGGCTTTTGGTGAAGCTGTTAATCAGGGCATAATGTCTTCCCAGTTGTCTTCCTTGCTGTTTCTTGTTGTGGGAATTTCGATGGCCCTCACTCCTTGGCTAGCTGAAGGAGGCCAGTTCCTTGCTTCCCGTTTCGAGCTGCATGATGTTCGAAGTTTATTACCTGTAGAAAGTGAGACAGACGATTTGCAAAATCATATTATTATCTGTGGATTTGGGCGAGTTGGGCAAATCATCGCACAACTTCTTTCTGAGCAACTTATTCCTTTTGTTGCACTAGACGTGAGAAGTGATAGAGTGGCAATTGGACGTTCCCTGGATCTCCCTGTGTACTTTGGAGATGCTGGTAGTCGAGAGGTCCTACATAAGGTTGGAGCTGAAAGGGCAAGTGCCGCTGCAGTAACTCTAGATTCCCCTGGAGCGAATTATAGAACAGTTTGGGCTCTGAGCAAGCACTTCCCAAACGTGAAAACTTTTGTTCGCGCTCATGATGTTGATCATGGATTGAATTTGGAAAAGGCTGGAGCTACCGCTGTTGTCCCAGAGACCTTGGAACCAAGTCTTCAACTAGCAGCTGCCGTGCTTGCTCAGGCTAAACTTCCTACATCAGAGATTGCAGCAACCATAAATGAATTCAGATCCCGCCATCTGTCTGAGCTCACTGAACTATCTGAAACAAATGGAAGTTCTTTTGGATATGGTTACAATAAAATTGTAAGCAAACCCAATTCATCAGATGATACACAGGTCTCTGAAGGGAAACTGGCGACATGA 3600 0.4286 MDIAFRLPQSNVVLDGLDSCSVFGGRGFGWAFLGNLRTIPKVRFSGMNKIDSRNGSRVDCLGELKVSSGKRSLCWKRNKLFRGNRRIWPKCQGNDSLSYVNGNGRNVDRVENEDEDYGSSAESSESLGEEGQGGRKEAGGEVVEEQDVDELKELLQKAKKELEAARENSIVFEEKVKKISETAIFLQDEAASAWNNVTSTLDIIQDIVGQEFVAKEAVQKATMALSLAEARLQVAIESLEVTKEAYDSSQGSDNSNDDKDIKQEEKELLDAQEDVKEGQTNLANCENELRCLQCRKEELQNEVNKLHEVAEQSQLKAAKADEDVANIMLLAEKAVAAEIDAAQHMNDAEIALQKADTSASSFNADTKDTLHVQEVVAIPVEEEVVQGFSGDDVVKREADFSIEDEPLLAMQSPETQSDNNRQSLESMAQSDYLSDHENGQLSLDSSKEAEVETEKSKNVVQTKKQETQKDLTRDNSSFAPKTLLKKSSRFFPASFFSFTADETDNTPASVFHGLVESAQKQLPKLIVGLCLIGAGLVLYTNRTERGAQLLQQPEVVATTVEEVSSTAKPLVRRFQDLPRRIKKIIASLPNQEVDEEEASLFDMLWLLLASVVFVPIFQKIPGGSPVLGYLAAGILIGPYGLSIIRHVHGTKAIAEFGVVFLLFNIGLELSVERLSSMKKYVFGLGSAQVLVTAVVVGLVAHYICGQAGPAAIVIGNGLALSSTAVVLQVLQERGESTSRHGRATFSVLLFQDLAVVVLLILIPLISPNSSKGGVGFQAIAEALGLAAVKAVVAIAAIIAGGRLLLRPIYKQIAENQNAEIFSANTLFVILGTSLLTARAGLSMALGAFLAGLLLAETEFSLQVESDIAPYRGLLLGLFFMTVGMSIDPKLLVSNFPVITGTLGLLIFGKTLLVSLIGRLFGISLISAIRVGLLLAPGGEFAFVAFGEAVNQGIMSSQLSSLLFLVVGISMALTPWLAEGGQFLASRFELHDVRSLLPVESETDDLQNHIIICGFGRVGQIIAQLLSEQLIPFVALDVRSDRVAIGRSLDLPVYFGDAGSREVLHKVGAERASAAAVTLDSPGANYRTVWALSKHFPNVKTFVRAHDVDHGLNLEKAGATAVVPETLEPSLQLAAAVLAQAKLPTSEIAATINEFRSRHLSELTELSETNGSSFGYGYNKIVSKPNSSDDTQVSEGKLAT* 1200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00091 1199 Coils Coil 254 316 - -
Lapu10g00091 1199 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1005 1146 IPR036291 -
Lapu10g00091 1199 MobiDBLite consensus disorder prediction 441 471 - -
Lapu10g00091 1199 Gene3D - 1004 1168 - -
Lapu10g00091 1199 NCBIfam monovalent cation:proton antiporter-2 (CPA2) family protein 607 887 IPR004771 GO:0006812|GO:0008324|GO:0016020
Lapu10g00091 1199 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 183 1181 - -
Lapu10g00091 1199 MobiDBLite consensus disorder prediction 410 440 - -
Lapu10g00091 1199 MobiDBLite consensus disorder prediction 404 474 - -
Lapu10g00091 1199 ProSiteProfiles RCK N-terminal domain profile. 1008 1130 IPR003148 GO:0006813
Lapu10g00091 1199 Pfam TrkA-N domain 1009 1122 IPR003148 GO:0006813
Lapu10g00091 1199 Coils Coil 141 175 - -
Lapu10g00091 1199 MobiDBLite consensus disorder prediction 102 144 - -
Lapu10g00091 1199 Gene3D - 596 981 IPR038770 -
Lapu10g00091 1199 FunFam K(+) efflux antiporter 2 chloroplastic 1004 1168 - -
Lapu10g00091 1199 Pfam Sodium/hydrogen exchanger family 605 976 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Lapu10g00091 1199 FunFam K(+) efflux antiporter 2 chloroplastic 596 982 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00091 Lapu-Chr10 2501805 2520569 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00091 91 1198 Inorganic Solute Cotransporters AT4G00630 69.469 0.0 1404
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00091 K03455 - gmx:100791174 1900.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu10g00091 10 2501805 2520569 Lapu10g00091 10 2501805 2520569 ECH
Lapu1g01574 1 28544239 28561697 Lapu10g00091 10 2501805 2520569 PCT