LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lapu10g00059	ATGGTGGAAGCTAGTAAAGATGCAGTAGCAGTTGATGCCTGTTCAAGAGAAGACTGGTTGTTGCATGCACAGGAACTTGTTCCTGTGGCTCTAGCTAAGGCAAGAGAGGTTAAGGGGTTCCCTGGTAGGTGGAAGATGATAATTTCAAAATTGGAGCAGATTCCATCCTGTTTATCGGATTTGTCTAGCCACCCTTGTTTCTCCAAGAATGCTCTTTGCAAGGAGCAATTGCAGGCTGTGTCAAAGACACTTAAAGAAGCCACGGAATTGGCTGAGTTGTGTGTGAAGGAGAAGTATGAGGGTAAGCTTCGGATGCAGAGTGATCTTGATGCATTAACTGGGAAACTGGATTTGAATTTGAAGGATTGTGGTCTCTTGATCAAGACCGGTGTGCTTGGTGAAGCTACTTTGCCATTAACAGTGTTAGGTTCTATGGCAGAATCAGATATTGCAGCACACAACAATATAAGAGAACTACTAGCGCGCCTTCAGATTGGTCACTTGGAAGCAAAGCACAAAGCCTTAGACAACCTCTATGATGTTATGAAAGAGGATGAGAAGAATGTTTTGGCTGTTCTTGGCAGGAGGAATGTTGCTGCTTTGGTTCAATTGCTCACAGCAACATCTCCTAGGATAAGGGAGAAGACGGTTACTGTTATATGCTCTCTTGTGGAATCCGGGAGCTGTGAGAAGTGGCTAGTTTCTGAAGGAGTTCTGCCACCTCTTATTAGGCTTGTTGAATCTGGAAGCGCTGTCAGTAAAGAGAAGGCAATAGTATCTCTTCAGAGATTGTCAATGTCAGCAGAAACAACTCGTGCAATTGTTGGACATGGTGGTGTTCGGCCATTGATTGAGCTATGTCAAAGTGGTGATTCTGTGTCACAGGCTGCTGCTGCCTGTACTCTGACAAATGTATCAGCTGTTCCTGAGGTGAGACAGGCTTTGGCTGAAGAAGGTATTGTAAGCGTTATGATCAATCTTCTTAATTGTGGAATTTTATTAGGTTCCAAAGAGTACGCGGCTGAGTGTTTGCAGAATCTCACTTCAAGCAATGAGCAATTGAGAAAGTCTGTTATATCAGAAGGTGGTGTTAGAAGTCTTCTGACCTATCTTGATGGTCCACTTCCCCAAGAATCTGCAGTTGGAGCATTGAGGAATCTGGTTGGATCAGTTTCTGAGGAAACTTTGGTTTCTCTTAGTTTGCTTCCCCGATTGGTTCACGTTCTGAAGTCTGGATCTTTGGGTGCTCAACAAGCTGCCGCTTCTGTCATTTGCCGAGTTTGCAGCTCAATGGAGATGAAGAAAATGGTTGGTGAAGCTGGCTGCATCCCTCTTCTTATAAAGATGCTTGAGGCTAAAGCAAATACTGCTAGAGAGGTAGCTGCTCAAGCAATTTCAAGCCTAATGGTTCTGTCCCAGAATCGGAGAGAGGTTAAGAAAGATGATAAAAGTGTGCCAAATCTTGTACAGTTGCTTGATCCAAGCACTCAGAACACTGCCAAAAAGTATGCAATTTCATGCCTTGGATCACTTTCCCCATGTAAGAAGTGTAAAAAACTAATGATTTCGTATGGAGCAATCGGGTATCTGAAGAAGCTTACAGAGATGGACATTCCAGGAGCTAAAAAGCTACTTGAGAGGTTGGAAAGAGGGAAATTGAGAAGCTTGTTCAGCAGAAAGTAG	1683	0.4373	MVEASKDAVAVDACSREDWLLHAQELVPVALAKAREVKGFPGRWKMIISKLEQIPSCLSDLSSHPCFSKNALCKEQLQAVSKTLKEATELAELCVKEKYEGKLRMQSDLDALTGKLDLNLKDCGLLIKTGVLGEATLPLTVLGSMAESDIAAHNNIRELLARLQIGHLEAKHKALDNLYDVMKEDEKNVLAVLGRRNVAALVQLLTATSPRIREKTVTVICSLVESGSCEKWLVSEGVLPPLIRLVESGSAVSKEKAIVSLQRLSMSAETTRAIVGHGGVRPLIELCQSGDSVSQAAAACTLTNVSAVPEVRQALAEEGIVSVMINLLNCGILLGSKEYAAECLQNLTSSNEQLRKSVISEGGVRSLLTYLDGPLPQESAVGALRNLVGSVSEETLVSLSLLPRLVHVLKSGSLGAQQAAASVICRVCSSMEMKKMVGEAGCIPLLIKMLEAKANTAREVAAQAISSLMVLSQNRREVKKDDKSVPNLVQLLDPSTQNTAKKYAISCLGSLSPCKKCKKLMISYGAIGYLKKLTEMDIPGAKKLLERLERGKLRSLFSRK*	561

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Lapu10g00059	560	Gene3D	-	152	392	IPR011989	-
Lapu10g00059	560	SMART	arm_5	351	389	IPR000225	GO:0005515
Lapu10g00059	560	SMART	arm_5	390	429	IPR000225	GO:0005515
Lapu10g00059	560	SMART	arm_5	267	307	IPR000225	GO:0005515
Lapu10g00059	560	SMART	arm_5	308	349	IPR000225	GO:0005515
Lapu10g00059	560	SMART	arm_5	185	225	IPR000225	GO:0005515
Lapu10g00059	560	SMART	arm_5	430	470	IPR000225	GO:0005515
Lapu10g00059	560	SMART	arm_5	471	513	IPR000225	GO:0005515
Lapu10g00059	560	SUPERFAMILY	ARM repeat	156	537	IPR016024	-
Lapu10g00059	560	Pfam	Armadillo/beta-catenin-like repeat	432	468	IPR000225	GO:0005515

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Lapu10g00059	Lapu-Chr10	2037132	2040786	Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lapu10g00059	416	543	U-box Gene Family	AT3G54790	29.688	6.21e-06	47.4

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lapu10g00059	-		-	var:108346326	997.653

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lapu1g01603	1	28809908	28813677	Lapu10g00059	10	2037132	2040786	PCT

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