Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00052 ATGAGCACACAGGTGCAGCAACTAAGAAGGTTCGACTCAATGGAACGTAGGCCAAGAATGCTGAAGGACTTCCTCAGCGACAACTTAAACTCTTGTTCCTCAAGCGGTTTCAAATCACTTCCAAGAAAACCAACAAGCATGCACACCCTCATAGAAATGGAACTCAAATCATCATCCTCACCACCATCAAACTCGCCCTTCCAAACACTCATGAACACCATAAGAAGCATCTCTTTCTTCACCTCAATGAGAAAATCACCCTCCGTGCTTTCCCTTCCCAGAAGCCTCTCTCGCAAACTGTCATCATCAAGGAGAAGAAGAACAAGAAGAACCAGAAGCCAAGGGTGCAACGATATCAGCATCACAACTACGGTGAAGATCAAGGACATCATACGGTGGAAATCGTTCAGGGACATCGTCGAAGCTCCCCCCCCACCACCTTTGGATTTCATGGGGGACCCCACCACCACCACCACCACTTGGAGTATCAGCAGTGGCTCTAGTTGGAGTGAGAGTGACTTTTTAACCTCTTCCTGGGAAGATCCACAAAACGACAGCGTCGAAACCAGTAAAAGGTTTTCTTTTTCACCCCTTGTTGTCGGCAAGGACCCCAATGCCACGGAAGCTTTATCTTGCCAAGAAGAACAAAACAGTCCAGTTTCTGTTCTTCAGGTTGGAGAAGATGAATTCTCACCTTTTGATCAAAGCCTTGCCAATATTCAAAGGAGAAAGCAGAAGTTCATACAAACAGTTCAGAAATTGGAGAGTCTTGCAAAACTTGACCTTGTGAACTTAGATCAATGCCTCTCATTGGATGACAACTCTCTCTATGATGAAGAGTGTGAAGATGATGGTGATGATGATAATGAGAGTGGAGAACAAGATTGGAGTGAGGAAAAGGCACATCAGCTGCTACATTGTGTGAAAGCAAGATGTTCAGCACATGGTTGTAAGGACTATTTGGATACACTTCTGTTGGACTTTTTCAGCGAAGAACTGAGTGAAAGTAGAAACCAATGGAAGAATGAAGAGGAGTTGGAGACATTGAGAATAGCTGAGGATTGGATAAATGGATCATTTGCTTTTGATGCAGGGCTTGCTGATAAAGAAGCTTATATCAAGGACATGGAAAGGAGAGATGAGTGGAGTAGGTTTAAGGAAGAGCAAGAAAAACTAGCTTTTGAAATTGAGAAAGCTATATTTCATAGTTTGATTGCTGATCTTGTTGACCTACAAGGTTAA 1242 0.4348 MSTQVQQLRRFDSMERRPRMLKDFLSDNLNSCSSSGFKSLPRKPTSMHTLIEMELKSSSSPPSNSPFQTLMNTIRSISFFTSMRKSPSVLSLPRSLSRKLSSSRRRRTRRTRSQGCNDISITTTVKIKDIIRWKSFRDIVEAPPPPPLDFMGDPTTTTTTWSISSGSSWSESDFLTSSWEDPQNDSVETSKRFSFSPLVVGKDPNATEALSCQEEQNSPVSVLQVGEDEFSPFDQSLANIQRRKQKFIQTVQKLESLAKLDLVNLDQCLSLDDNSLYDEECEDDGDDDNESGEQDWSEEKAHQLLHCVKARCSAHGCKDYLDTLLLDFFSEELSESRNQWKNEEELETLRIAEDWINGSFAFDAGLADKEAYIKDMERRDEWSRFKEEQEKLAFEIEKAIFHSLIADLVDLQG* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00052 413 PANTHER OS04G0572500 PROTEIN 6 409 - -
Lapu10g00052 413 MobiDBLite consensus disorder prediction 93 113 - -
Lapu10g00052 413 MobiDBLite consensus disorder prediction 152 168 - -
Lapu10g00052 413 MobiDBLite consensus disorder prediction 144 168 - -
Lapu10g00052 413 Coils Coil 237 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00052 Lapu-Chr10 1961790 1965425 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00052 14 407 TRM (TON1 Recruiting Motif) Superfamily AT4G00770 33.333 1.22e-41 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00052 - - var:108346936 617.461
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu10g00052 10 1961790 1965425 Lapu10g00052 10 1961790 1965425 ECH