Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00046 ATGGGTGATGAATCTTCTGGAGACGTTGATCTAAGGTTGGGAGAGCCTAAGGGGCCGAAAGTGGAGCCCGAGACGGAGGAGGGTTCCGCGATACGTGTGATGCCGGTGGCTGTGCACGTGCCGCCAGGGATGTCCATGTCCATGTCCAAGGCCCTCGCCCAAGCCCAGGCCCAACCACAGAAGCGGGCCTCCACCAAAGACCGTCACACCAAAGTCGAGGGGAGAGGCAGGAGGATCCGAATGCCCGCCACGTGTGCGGCGCGGATCTTCCAACTCACCCGAGAACTCGGCCACAAGTCTGACGGCGAAACCATCCGCTGGCTCCTCGAACACGCCGAGCCCGCCATCATCGCCGCCACCGGCACCGGCACCGTTCCTGCCATCGCCATGTCCGTCAACGGTACGCTCAAGATTCCGACCACATCTCCCTCCGACCCGGAACCCGGAGACCCGCCCGAGAGGAAGAAGCGCAAGCGACCCGCCAACAGCGCCTACGTGGACGTAAACGAGGGCGCCGTTTCAGTTCCCGCCGGCCTCGCGATCTCGAAGAAACAAAACGCGACGACGACGACGACAGCCACCCCAACGACTACGACGACAATTCCGCAACACACCGCGATTCCCTTGCCCCAGGGCGTGGTCCCCGTGTGGGCCGTGCCTTCAAACGCCATGGTTCCCACTGCAGGCGCGTTCTTCGTCGTCCCCCAAACGGCGTCTTTTCAGCACCAGCCGCAGTTTTTCACCATAGCACGACCTATCTCCGCGTTTGTCTCCTCCATGGTCACACCTGTTCAACTCCAGCCAACCTCCGCATCCTCTCCCGCAAACGCTAACCCTTCCTCTACCGCGCCGTCGTCGAAGTCGCCAGCTAGAGCCACAGTCATGGCTCCAACCACCACCACCACCACAACACACATGCTGAGAGATTTCTCATTGGAGATTTACGACAAGCAAGAGTTGCAGTTCATGTCGCGCGCGTCTTCCAAGCATTGA 993 0.6103 MGDESSGDVDLRLGEPKGPKVEPETEEGSAIRVMPVAVHVPPGMSMSMSKALAQAQAQPQKRASTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLEHAEPAIIAATGTGTVPAIAMSVNGTLKIPTTSPSDPEPGDPPERKKRKRPANSAYVDVNEGAVSVPAGLAISKKQNATTTTTATPTTTTTIPQHTAIPLPQGVVPVWAVPSNAMVPTAGAFFVVPQTASFQHQPQFFTIARPISAFVSSMVTPVQLQPTSASSPANANPSSTAPSSKSPARATVMAPTTTTTTTHMLRDFSLEIYDKQELQFMSRASSKH* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00046 330 Pfam TCP family transcription factor 64 161 IPR017887 -
Lapu10g00046 330 ProSiteProfiles TCP domain profile. 65 119 IPR017887 -
Lapu10g00046 330 MobiDBLite consensus disorder prediction 267 300 - -
Lapu10g00046 330 MobiDBLite consensus disorder prediction 148 163 - -
Lapu10g00046 330 MobiDBLite consensus disorder prediction 1 27 - -
Lapu10g00046 330 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 43 314 IPR005333 GO:0003700
Lapu10g00046 330 MobiDBLite consensus disorder prediction 136 163 - -
Lapu10g00046 330 MobiDBLite consensus disorder prediction 1 30 - -
Lapu10g00046 330 MobiDBLite consensus disorder prediction 50 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00046 Lapu-Chr10 1916507 1918098 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00046 45 329 TCP Transcription Factor Family AT2G45680 55.806 2.22e-92 277
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Lapu10g00046 TCP 8.8e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00046 - - pvu:PHAVU_010G089100g 506.908
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu10g00046 10 1916507 1918098 Lapu10g00046 10 1916507 1918098 ECH