Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00045 ATGCATCTTCTTCTTCGTCAAACCTTCCAAATCATAAACCTTTCCCTCTCTTTCCTCACACAATTCTACCTTAATTCTCTGGTGCACCTTCTATTTCATCCATATGGGTATCCAAACCCTTATTTGTACCCTGGCAACACCCCTTCATACCCTCCTCCTGATCCATATGCACAACCACCGTATCCATATCCTCCAAATCCTCCAGATACCTTCAACTACTCATACCCTCCGCCTCCGCCTCCTCCACCACCCTCAGCCCCTCATTATAGCAACACAGACCATTCCTCCTACCCTCCTCCTCCACCACCTCATGATTCCTTTGGCTTTCCTATGCCTCAATCACCCAATACTTATCCTTACCCTCACCAAGATCCTCCAGAATGGAGTGTCACAGGAGATGGAGAACCTCAAACTAGTGATAGTTTTAGCCCTCCTGTCTGTTCTATTTACCCTCCTTTGGATGATCACATGAGCATTGTTAGGCTGTCTGATACCCCAAGTACACTTTCATTATTAACGCATTCCCCGCCAATTTCAAATTATAATAGAGATGAGTTTTATGGTTACTCTATCGACTCGCCCTCAGATTTGGATCAGGGGGACCCTTCTACACTTTCTGCTCAATCTGATGACTCACTGAATAATCAGAGCTTGCAGATTGTCCCAGCTCAGACCAAAGCGTCTCTACCAGTTCTGCTCCTGCATGGGAATTTAGATATTTGGGTTCATGGAGCCAAACACCTTCCAAACATGGACATGTTCCACAAGACTTTGGGAGATGTGTTTGGGAGGTTGCCTGTCAACAAGGTGGATGGAACGGTGAGCCAGAAGATTACCAGTGATCCCTATGTAACAATTTCTGTGTCAAATGCTGTAATTGGGAGGACTTTTGTGATTAGCAATAGTGAAAACCCTGTGTGGGAGCAACATTTCTATGTTCCTGTTGCACATCATGTAGCTGAAGTTCATTTTGTTGTAAAGGACAGCGACGTGGTGGGTTCACAGCTCATTGGTGTTGTGGCAATTCCAGCAGAACAATTGTTCGCAGGGGAGAAGATACAAGGGACCTACCCTATTCTGAATAGCAATGGGAAGCCTTGTAAGCCTGGTGCTGTATTGACATTATCCATTCAGTACATTGCAATGGAGAAACTTATCACTTATCTTCAAGGAGTTGGAGCTGGTCCTGAATATTTTGGGGTTCCTGGCACGTACTTTCCAATGAGGAAAGGTGGAACGGTTACTCTGTATCAAGATGCTCATGTCCCAGATGGTTCTCTACCTAATGTTATGCTTAACCATGGCATGTATTATGCTCATGGAAAGTGTTGGCAGGACATCTTTAATGCCATACGTGGAGCTCAGAGATTGGTTTACATTACAGGGTGGTCAGTGTGGCACAAAGCTAGGTTGGTAAGGGATGCTGGCAATTCACCAAATTTCACCCTGGGTGAACTTCTAAGGACTAAGTCATCGGAGGGAGTAAGAGTGCTTCTCCTTGTATGGGATGACCCTACATCAAGAAGCATTCTTGGTTACAAAATGGATGGTGTGATGGCAACTCATGACGAGGAAACTAGACGATTTTTCAAACACTCTTCTGTGCAAGTGCTGCTTTGTCCTCGCATTGGTGGAAAACGACATAGCTGGGCCAAACAAAAGGAAGTTGGAACAATATATACACATCATCAGAAAACTGTAATTGTGGATACTGATGCTGGAAATGACAGAAGAAAAATTGTTGCATTTGTTGGTGGACTTGATTTGTGTGATGGGCGATATGATAATCCCCACCATCCTCTCTTTAGGACACTGAAGACACTGCATAAGGATGACTATCACAACCCTACTTTCACGGGTAATACTGGTGGTTGTCCACGGGAGCCATGGCATGACTTACATTCTAAAATTGATGGTCCAGCAGCTTACGATGTTTTGACCAACTTTGAGGAGCGCTGGTTAAGAGCTGCGAAACCTAAAGGGATTAAAAAGTTTACTAGTTCATATGATGATGCATTGCTTAAGCTAGACAGAATAAAAGATATTATCAGTTCATCTGATGATCTTAATCTTGATGATGAGGATAACCCTGCATCATGGCATGTTCAGATATTCCGTTCAATTGATTCAAGTTCTGTCAAGGGATTTCCGAAGGAGCCAAAAGATGCATCAAGCATGAATCTAGTATGTGGGAAGAATGTGCTGATTGACATGAGTATACATACAGCATATGTAAAGGCCATTCGCGCTGCACAACATTATATTTATATTGAGAATCAATATTTCATTGGGTCTTCATATAATTGGAGTAATTATAAAGACCTTGGTGCTAATAATTTAATTCCGATGGAAATTGCGCTGAAGATTGCTGCAAAGATAAGGGCAAATGAGAGATTTGCAGTGTACATTGTTATTCCAATGTGGCCAGAGGGTGTTCCAACAGGTGCTGCCACCCAAAGGATTCTATTTTGGCAGCATAAAACAATGCAAATGATGTATGGGACAATTTACAAGGCTTTGGTTGAAGTTGGGCTTGAAGCAGCATTCTCTCCACAAGACTATTTGAACTTCTTCTGTCTTGGCAATCGTGAGGCAATAGATATGTATGAGAATGTCACTGTGTCTGGAACTCCTCCGCCGGCAAATAGTCCACAAGCATTTAGTAGAAACAATCGACGTTTCATGATTTATGTTCATTCAAAAGGCATGATAGTTGATGATGAATATGTCATATTGGGGTCTGCAAACATCAACCAGCGCTCTATGGAAGGAACAAGGGACACGGAGATTGCAATGGGTGCGTACCAACCTTATCATACCTGGGCAAGAAGAAAGTTTTATCCACTTGGGCAGATCCATGGATATAGAATGTCACTTTGGGCCGAACATACAGGTACTATTGAAGACTGTTTTCAACAACCAGAGAGCCTTGAATGTGTTAGGATGATTAGAACAATGGGTGAAGAGAACTGGAAACAATTTGCATCAAATGATACCACAGAGATGAAAGGGCATCTGCTCAAGTACCCTGTAGAAGTGGACAGAAAGGGTAAGGTAAGATCCCTTCCTGGCCAGGATGAGTTCCCGGATGTGGGAGGAAAGATTATAGGATCATTTATTGCCATTCAGGAAAATCTAACCATTTGA 3147 0.4293 MHLLLRQTFQIINLSLSFLTQFYLNSLVHLLFHPYGYPNPYLYPGNTPSYPPPDPYAQPPYPYPPNPPDTFNYSYPPPPPPPPPSAPHYSNTDHSSYPPPPPPHDSFGFPMPQSPNTYPYPHQDPPEWSVTGDGEPQTSDSFSPPVCSIYPPLDDHMSIVRLSDTPSTLSLLTHSPPISNYNRDEFYGYSIDSPSDLDQGDPSTLSAQSDDSLNNQSLQIVPAQTKASLPVLLLHGNLDIWVHGAKHLPNMDMFHKTLGDVFGRLPVNKVDGTVSQKITSDPYVTISVSNAVIGRTFVISNSENPVWEQHFYVPVAHHVAEVHFVVKDSDVVGSQLIGVVAIPAEQLFAGEKIQGTYPILNSNGKPCKPGAVLTLSIQYIAMEKLITYLQGVGAGPEYFGVPGTYFPMRKGGTVTLYQDAHVPDGSLPNVMLNHGMYYAHGKCWQDIFNAIRGAQRLVYITGWSVWHKARLVRDAGNSPNFTLGELLRTKSSEGVRVLLLVWDDPTSRSILGYKMDGVMATHDEETRRFFKHSSVQVLLCPRIGGKRHSWAKQKEVGTIYTHHQKTVIVDTDAGNDRRKIVAFVGGLDLCDGRYDNPHHPLFRTLKTLHKDDYHNPTFTGNTGGCPREPWHDLHSKIDGPAAYDVLTNFEERWLRAAKPKGIKKFTSSYDDALLKLDRIKDIISSSDDLNLDDEDNPASWHVQIFRSIDSSSVKGFPKEPKDASSMNLVCGKNVLIDMSIHTAYVKAIRAAQHYIYIENQYFIGSSYNWSNYKDLGANNLIPMEIALKIAAKIRANERFAVYIVIPMWPEGVPTGAATQRILFWQHKTMQMMYGTIYKALVEVGLEAAFSPQDYLNFFCLGNREAIDMYENVTVSGTPPPANSPQAFSRNNRRFMIYVHSKGMIVDDEYVILGSANINQRSMEGTRDTEIAMGAYQPYHTWARRKFYPLGQIHGYRMSLWAEHTGTIEDCFQQPESLECVRMIRTMGEENWKQFASNDTTEMKGHLLKYPVEVDRKGKVRSLPGQDEFPDVGGKIIGSFIAIQENLTI* 1049
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00045 1048 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 894 921 IPR001736 GO:0003824
Lapu10g00045 1048 ProSiteProfiles C2 domain profile. 221 357 IPR000008 -
Lapu10g00045 1048 MobiDBLite consensus disorder prediction 190 211 - -
Lapu10g00045 1048 Pfam Phospholipase D C terminal 968 1038 IPR024632 -
Lapu10g00045 1048 MobiDBLite consensus disorder prediction 49 122 - -
Lapu10g00045 1048 MobiDBLite consensus disorder prediction 196 211 - -
Lapu10g00045 1048 CDD C2_plant_PLD 231 380 - -
Lapu10g00045 1048 FunFam Phospholipase D 707 940 - -
Lapu10g00045 1048 FunFam Phospholipase D delta 231 375 - -
Lapu10g00045 1048 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 558 593 IPR001736 GO:0003824
Lapu10g00045 1048 Gene3D C2 domain 232 367 IPR035892 -
Lapu10g00045 1048 PANTHER PHOSPHOLIPASE D 228 1038 IPR015679 -
Lapu10g00045 1048 Pfam Phospholipase D Active site motif 895 921 IPR001736 GO:0003824
Lapu10g00045 1048 Pfam Phospholipase D Active site motif 559 593 IPR001736 GO:0003824
Lapu10g00045 1048 Gene3D Endonuclease Chain A 705 939 - -
Lapu10g00045 1048 SMART C2_3c 237 356 IPR000008 -
Lapu10g00045 1048 MobiDBLite consensus disorder prediction 49 147 - -
Lapu10g00045 1048 SUPERFAMILY Phospholipase D/nuclease 728 980 - -
Lapu10g00045 1048 Pfam C2 domain 236 359 IPR000008 -
Lapu10g00045 1048 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 234 380 IPR035892 -
Lapu10g00045 1048 SUPERFAMILY Phospholipase D/nuclease 443 657 - -
Lapu10g00045 1048 SMART pld_4 894 921 IPR001736 GO:0003824
Lapu10g00045 1048 SMART pld_4 558 593 IPR001736 GO:0003824
Lapu10g00045 1048 FunFam Phospholipase D delta 434 672 - -
Lapu10g00045 1048 Gene3D Endonuclease Chain A 433 676 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00045 Lapu-Chr10 1884618 1893315 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00045 60 1048 Phospholipase D Gene Family (Wang group) AT2G42010 68.359 0.0 1395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00045 K01115 - gmx:100805294 1646.33