Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu10g00027 ATGCCTGGTAGGACCGAAAACACCATCAAGAACCACTGGAACGCTACCAAGCGCAGAAGCTCCAAGGGTGCACCCACACTTCTCGAGAGCTACATAAGGAAAGTCACTGCGGCGGAAGAGTCTGAGAAGGAGTTGAAGAACTCCATGAGCTCCGAAGGTGACTTCAGCTCCGAGGAGGAGGAGCTTGGGTGGAGCCTGCAGCACCACGTGCCATGTGGTGGTGAGGGTGGCTACGTGCCACTGATGGTGAACGCTGGGGAAGAGAGCGTGATTGATTACGAGGTTGCCATGCAGATATCACCGGAGGTTCAGATGAGGAAGGAGATGGATCTCATGGAGATGATCTATAGACAGGACATCATTGAAACTGTGGTTTTTTCTGGTTGGGTTTGGTTGCATGCCGTGGATGTTTTAGTTCCTTTGTTTTGTACTGTGATTCTCTTCTAA 447 0.5101 MPGRTENTIKNHWNATKRRSSKGAPTLLESYIRKVTAAEESEKELKNSMSSEGDFSSEEEELGWSLQHHVPCGGEGGYVPLMVNAGEESVIDYEVAMQISPEVQMRKEMDLMEMIYRQDIIETVVFSGWVWLHAVDVLVPLFCTVILF* 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu10g00027 148 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 21 IPR017930 -
Lapu10g00027 148 MobiDBLite consensus disorder prediction 1 25 - -
Lapu10g00027 148 Coils Coil 28 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu10g00027 Lapu-Chr10 1335919 1337367 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu10g00027 1 36 MYB Transcription Factor Family AT4G18770 52.273 2.32e-08 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu10g00027 K09422 - gmx:100793032 130.568