Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g1533 ATGACTTCACCTAGCATCTCCTCTGAGGACCCGTTGAAGTGGGGCATGGCAGCGGATTCACTGAAGGGAAGTCACTTTGATGAAGTGAAAGAGATGATTGGAGAGTACAGGAAGGCAGTGATATATCTTGATGGTGGGAGTGGGAATGGGAACACATCACTAAGCATAGCTCATGTTGCTGCTGTTGCTAACAGTAACTCACATGTCAAGGTTCACCTCTCTCACTCTGCAAGGCCAGCAGTTGATGCCAGTTGTCAATGGATCATGGAAAGCATTAACAATGGAACCCAGATATATGGTGTTACAACTGGATTTGGTACTGCCTCCAATAGGAGGACAAAACAAGGCCTTCACCTTCAGAAGGAGATGGTCAG 374 0.4679 MTSPSISSEDPLKWGMAADSLKGSHFDEVKEMIGEYRKAVIYLDGGSGNGNTSLSIAHVAAVANSNSHVKVHLSHSARPAVDASCQWIMESINNGTQIYGVTTGFGTASNRRTKQGLHLQKEMV 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g1533 124 PANTHER HISTIDINE AMMONIA-LYASE 6 124 IPR001106 -
Lan9g1533 124 Pfam Aromatic amino acid lyase 54 123 IPR001106 -
Lan9g1533 124 Gene3D - 2 124 IPR024083 -
Lan9g1533 124 PANTHER PHENYLALANINE AMMONIA-LYASE 6 124 - -
Lan9g1533 124 SUPERFAMILY L-aspartase-like 9 123 IPR008948 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g1533 Lan-Chr9 21750157 21750530 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g1533 6 124 Monolignol Biosynthesis Gene Families AT2G37040 53.782 3.53e-38 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g1533 K10775 - ccaj:109814379 153.295