Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g1520 ATGCCTGGTGCTGAGAACTCAAGCAATTGCGATAGAGAAGTTGAAGCATTTGTTGAAGTTGATCCAACAGGAAGGTTTGGTCGTTACAATGATCTACTTGGTTGTGGTGCTGTGAAGAAAGTTTACAGAGCCTTTGATCAAGAGGAAGGAATTGAAGTGGCTTGGAATCAGGTCCGTCTTCGGAAATTCAGCAATGATCCCATCCTCCTAAACAGGCTTCATTCTGAGATTGAGTTGCTCAGAACACTCAACAACAAGTATATCATTGTTTGTTATAGTGTGTGGAAAGATGAGGAGCACCATAATATCAATTTTATTACTGAGGTGTGTACTTCTGGGAATTTGAGGGATTATAGGAAGAAGCATCCTCATGTTTCCATTCGGGCATTGAAGAAATGGTCTAAACAACTTCTTCAAGGATTGGAGTATCTGCATACTCATGATCCTTGCATTATCCACAGGGATCTCAATTGCAGTAACATCTTTGTTAATGGGAACATTGGTCAGGTGAAAATTGGTGATCTTGGATTGGCAGCTATAGTGGGACGGAACCATGCAGCACATTCAATTTTAGGGACACCAGAGTACATGGCACCCGAGCTGTATGAGGAAGATTATACTGAGATGGTGGACATATACTCTTTTGGAATGTGTTTGCTTGAAATGGTTACAATGGAGATACCCTACAGTGAATGTGATAGTGTTGCCAAGATATACAGAAAGGTCACAATGGGAACTAAACCTCAATCATTGAACAAAGTCACAGATCCAGAGGTGAAGGCATTCATTGATAAGTGCATAGCACAACCAAGGGCAAGGCCTTCAGCTACAAATCTTCTTATGGATCCTTTCCTTTTTGAACTCAACAACGAACAATCAACTCCCATCAATTGA 894 0.4105 MPGAENSSNCDREVEAFVEVDPTGRFGRYNDLLGCGAVKKVYRAFDQEEGIEVAWNQVRLRKFSNDPILLNRLHSEIELLRTLNNKYIIVCYSVWKDEEHHNINFITEVCTSGNLRDYRKKHPHVSIRALKKWSKQLLQGLEYLHTHDPCIIHRDLNCSNIFVNGNIGQVKIGDLGLAAIVGRNHAAHSILGTPEYMAPELYEEDYTEMVDIYSFGMCLLEMVTMEIPYSECDSVAKIYRKVTMGTKPQSLNKVTDPEVKAFIDKCIAQPRARPSATNLLMDPFLFELNNEQSTPIN* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g1520 297 Gene3D Transferase(Phosphotransferase) domain 1 110 290 - -
Lan9g1520 297 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK11-RELATED 4 289 - -
Lan9g1520 297 SUPERFAMILY Protein kinase-like (PK-like) 20 285 IPR011009 -
Lan9g1520 297 Pfam Protein kinase domain 31 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan9g1520 297 Gene3D Phosphorylase Kinase; domain 1 11 108 - -
Lan9g1520 297 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 4 289 - -
Lan9g1520 297 ProSiteProfiles Protein kinase domain profile. 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g1520 Lan-Chr9 21686948 21688510 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g1520 5 285 MAP Kinase Kinase Kinase AT5G55560 76.512 4.62e-170 472
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Lan9g1520 Pkinase 3.1e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g1520 K08867 - gmx:100807414 548.895