Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g1515 ATGGAAGAAAACAAAGAGGAGGCACTTAAAGCAATAGAGAATGCTGAGAAGCGATTTGCTCAGAGGGACTATGTTGGTGCAAAAAACTATGCTTTGAAGGCTAAAACTCTTTTTCCAGGATTGGAGGGTATATCTCAAATGGTGGCCACATTTGAAGTTTACATTGCTTCTGAGGTCGCACATAATGGTGAACTAGACTATTATTCAATTCTCAGATTAAAACCTTCCGCCGATACACAGGCTGTGAAGAGACAGTATAAGAAGTTGGCAGTGTTGCTTCATCCAGACAAGAACAAATGTGTCGGAGCTGATGGGGCATTTAAGCTTGTTTCTGAGGCATGGGCATGGCTTTCAGATAATGTGATGCGCAGTTCTTATGATATCAGGAGAAATGCACAGTTTGATGGGATTTATCAAAAAAATATGTCTTCTATTCATGCTAAAGGTTATGACAAATGTTCCAATTCATCAATATCTCATGGCAGGCCTGACACCTTTTGGACTATTTGCACCTCTTGCAAGGTTCAGTATGAGTATCTGCGCAAGTATGTAAATAAAAAGCTTTCATGTAAGAACTGTCGTGGTACTTTTGTTGCTGTTGAAACTGGGGCAGCCCCAGCAAATGGTTCGTTCCCATATTGTCCCTGGACATATATGCAAGGAAATGGTTATGAAAGCCATTCATATGATGGAGTTACGTTTCTTCCAACCAGTTCCACCTATATCAATGGCAATGGGGTCACAGGATACCATTCTGGGCATGGATATGAGTACGTTTCAGATGTTTCGTTTCAATGGAACTCTACTGGACTTGTCAATCAAAATGGATCAACTACTGTATCCGCTGATTCTGTTTATCAGGCTAATGGAAATGCAAAGAGGGGAAGGCCAAAAGTCAAATCTGAAGTTGATGGAAGGCATCACATGGCTGACACTGTGGTTGACTTCAACTCAGTTGTACCACCCTCCAGCAATGAACCAGCAGAAGTTAAGCTAAGTAGACCTGACAAGAAAAGGAAAGTTGTTATGGGGGTGGGTTTCAGAAATGGCTCTGAAGACAAGGGGTCCAAATGCTCTTCAGATTCAATAGTGGCTAATGGAATTGGACGAGGCCAGAAGCTTTCGTACACAAGTGAAGTTCAAACCAAACAGTGTAACATGGCACCAGCATTTGACGCAAGAAAGTTATTGATTGAGAAAGCCAGGAAAGAAATCAGGAAGAAACTGGAAGAGATGAAATTATCGTATAATGCTGCAGCTACTGCTGCTAATGAGAAAGAAAAATCACAAGCTGAAGATGGTCAAGTCAGAAGAGAGACATGTAGAAGAACAATTCTTAATGTTCCTGGTCATCAACCTAAGCATGGGAAAACTGCTCCAGTCTCAATAACTGTCCCCGATCCTGACTTCCATGACTTTGATAAAGATAGGTCAGAGGAATGCTTCAAGCCGAAGCAAATATGGGCACTATATGATGAGGAAGATGGAATGCCACGGTTGTATTGTTTGATCCGTGAGATAATCTCTGTCAATCCATTTAAGATTCATATTAGTTACTTGGGTTCCAAAACTTATGGCGAGTTTGATTCAGTAAACTGGATTGATTCAGGTTTCACTAAATGTTGCGGAAATTTCAGGGCTGCAAATCCTGATTTTGTTGAGCAAGTTAACATTTTTTCTCACGTTCTAAGCAAGGAGAAGGCTGGTCGAGGAGGATGCATTCGCATATATCCGAGAAGTGGAGATATTTGGGCTGTTTATCAAAATTGGTCACAAGATTGGGCCAGATCTACTCCTGATGAAGTGAGGCATCAATATGAAATGGTGGAAGTGCTGGGTGATTACTCTGAGGAACTTGGTGTTTGCGTTTCACCCCTAATTAAGTTAGCTGGATTTAAAACAGTGTATAAGGCGAATACAGACAAAAGTGCAATTCAATGGATACCAAGAAGAGAAATGTTGCGCTTTTCGCACCAAGTTCCTTCTTGGTTGCTGAAGGGTACAGAGGCAAGCAATTTGCCTGAAAGGTGTTGGGATCTCGATCCGGCTGCAACTCCAGATGAACTTCTTCATGCTGCACCTACAGAAGCAAATGGTTTGTAG 2103 0.4165 MEENKEEALKAIENAEKRFAQRDYVGAKNYALKAKTLFPGLEGISQMVATFEVYIASEVAHNGELDYYSILRLKPSADTQAVKRQYKKLAVLLHPDKNKCVGADGAFKLVSEAWAWLSDNVMRSSYDIRRNAQFDGIYQKNMSSIHAKGYDKCSNSSISHGRPDTFWTICTSCKVQYEYLRKYVNKKLSCKNCRGTFVAVETGAAPANGSFPYCPWTYMQGNGYESHSYDGVTFLPTSSTYINGNGVTGYHSGHGYEYVSDVSFQWNSTGLVNQNGSTTVSADSVYQANGNAKRGRPKVKSEVDGRHHMADTVVDFNSVVPPSSNEPAEVKLSRPDKKRKVVMGVGFRNGSEDKGSKCSSDSIVANGIGRGQKLSYTSEVQTKQCNMAPAFDARKLLIEKARKEIRKKLEEMKLSYNAAATAANEKEKSQAEDGQVRRETCRRTILNVPGHQPKHGKTAPVSITVPDPDFHDFDKDRSEECFKPKQIWALYDEEDGMPRLYCLIREIISVNPFKIHISYLGSKTYGEFDSVNWIDSGFTKCCGNFRAANPDFVEQVNIFSHVLSKEKAGRGGCIRIYPRSGDIWAVYQNWSQDWARSTPDEVRHQYEMVEVLGDYSEELGVCVSPLIKLAGFKTVYKANTDKSAIQWIPRREMLRFSHQVPSWLLKGTEASNLPERCWDLDPAATPDELLHAAPTEANGL* 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g1515 700 ProSitePatterns Nt-dnaJ domain signature. 107 126 IPR018253 -
Lan9g1515 700 PANTHER BNAC03G44070D PROTEIN 1 692 - -
Lan9g1515 700 CDD DnaJ 66 119 IPR001623 -
Lan9g1515 700 Pfam DnaJ domain 66 127 IPR001623 -
Lan9g1515 700 Gene3D DnaJ domain 64 168 IPR036869 -
Lan9g1515 700 Pfam Domain of unknown function (DUF3444) 462 669 IPR024593 -
Lan9g1515 700 SMART dnaj_3 65 122 IPR001623 -
Lan9g1515 700 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Lan9g1515 700 PANTHER BNAC03G44070D PROTEIN 1 692 - -
Lan9g1515 700 SUPERFAMILY Chaperone J-domain 60 131 IPR036869 -
Lan9g1515 700 PRINTS DnaJ domain signature 68 86 IPR001623 -
Lan9g1515 700 PRINTS DnaJ domain signature 86 101 IPR001623 -
Lan9g1515 700 PRINTS DnaJ domain signature 102 122 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g1515 Lan-Chr9 21664612 21667919 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g1515 4 298 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 30.818 4.00e-29 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g1515 - - gmx:100792639 1140.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g0019 11 145529 149158 Lan9g1515 9 21664612 21667919 LSH