Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g1503 ATGAAAAAAGTCCTTCCTCCAAGGGCAATCATCACTGACCAAGCCAAGGAAGCAATTGTAGCTTGTACAAATGAGTTCATTGGCTTCATCACTATGGAGGCTAATGACATTTGCCTCAATGAAAACCGTTCAATTATTACTGCTCAGGATTTGTTGTTCGCTATGGACAGGTTTGGATTTGATAACTATTTCAACATTCTCACTCTTTACCTCCATCGCTATCGCCAAAATGTTGCTGCTGCTTCACTCTTAGTCACTAACATGCCTCCACCTCACCTTTCTGAGCCACCATTGCTGGTTCAACCAACAATGCCACAAATGGGTAATAATGTCATCACTCACTTTCATCCCTTTACTTTCATCAATCGTCATCGCTTCTTCCATGACTGA 390 0.4179 MKKVLPPRAIITDQAKEAIVACTNEFIGFITMEANDICLNENRSIITAQDLLFAMDRFGFDNYFNILTLYLHRYRQNVAAASLLVTNMPPPHLSEPPLLVQPTMPQMGNNVITHFHPFTFINRHRFFHD* 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g1503 129 Gene3D Histone, subunit A 1 86 IPR009072 GO:0046982
Lan9g1503 129 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-6 1 85 - -
Lan9g1503 129 PRINTS CCAAT-binding transcription factor subunit A signature 19 37 - -
Lan9g1503 129 PRINTS CCAAT-binding transcription factor subunit A signature 38 56 - -
Lan9g1503 129 PRINTS CCAAT-binding transcription factor subunit A signature 57 75 - -
Lan9g1503 129 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 1 85 IPR027113 GO:0001228|GO:0006355|GO:0016602
Lan9g1503 129 SUPERFAMILY Histone-fold 1 102 IPR009072 GO:0046982
Lan9g1503 129 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 1 55 IPR003958 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g1503 Lan-Chr9 21622517 21622906 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g1503 1 87 CCAAT-HAP3 Transcription Factor Family AT5G47670 47.872 5.24e-27 98.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Lan9g1503 CBFD_NFYB_HMF 1.1e-10 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g1503 K08065 - oeu:111368411 97.8265