Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g1497 ATGAGTGTAAGCTGTCGCCGTTTTGTGGAATGGAAAGAGCAGTTTGTGTCACAGGAGCGTGGCAACCGTGTGGTCCACTATTACCTGAAGGATTCTCATGGAGAATCCGTGCTTGCAGTTGTGGGCACCGAGAGGAGTCTTAGACACATGTTCTATGTTGTTTCTGAGGAGTTCCTTGAGATTTATGCAAAGGACGGTTCCGTTTCTGCTGGTTTTAAATGGAGGTCTAGAAGAGAGGTGGTAGATTGGCTGACATCAACATTATCAAAGCAGTATCTGCCGGGAGATAGAAATTTGTCACCTGGTCATAATTTGGCACAAGCTCACGAGGCCACAGATAGCATCAATGAAGTTGGTGCTCTGCCTACACAAATAACAGATGACAAGAATTCGGACATTGTTTGGTCAGGAGTGCCATGGACATGTGGCAAACAACTTAAGCACTATCCTGCTTTTTCCAGGAATGGGATCAAAATTGCAATTCAATCTTTCATTTTTGTCATGGCCAAGGGAGAGAATCATTACATTGCCTATTTGGAGGATATGTATGAAGACAAGAGGGGCCAGAAAAAGGTCAGGGTGAGGTGGTTTCACCATAATCAAGAAGTCAAAGGTGTAAATCTTGTGCGAAATCCTCACCCTCGGGAAATTTTTATCACGCCTTATTCTCAAGTCATCAGTGCAGAGTGTGTTGATGGTCCTGCCACAGTGTTAACTCGTGACCATTATTTAAAATGCTTGCCTTCTTTTTGCCCTACTTCAATGGACAAAATACATTTGTGCTTTAGGCAATTTAGAAGCAACAAAGTGAAGCCTTTTGACTTGAGTAAACTGCGTGGCTACTATGATCAACCAATTCTCTCTTGTTTGCACCATGATTCCATCCAAAACCCGGAGCCTAATAGTATTGCTGAAGATGAAGAATGTAACACAGGTGATGATGTAAAGCCGGGATCTAAGAGGGCTAGAAGTGGTAGGGGGTCTCCTCAGTCTTGGATAGATCACCAGGGAGTTAGGAAGTTAATTAGAAGTCAGCAAATGATGGTTTACAAAACCTTCCGGAATGCAAATTACGGTCAACCAGATAGGCGATTGCTTTCGCTGAAGAAGGTTGATTGTCAACCTTTGTACAACCCGACATATAAGATTGATGACAAGATAGAGTTTCTCTGTCACGACAGTGGCATCAGAGGCTGTTGGTTCAGGTGTACAGTTCTGCAGATATCTCGGAAATTGTTGAAAGTCCAATATGATGATTTGCAGGATGAGGATGGAAACGGAAATCTTGAGGAATGGATTCCTACTTACAAATTGGCCATGCCTGATAAACTTGAGATGAGACATTCTGGTCGGCCAACCATCAGGCCAGCCCCGGCTTATGTGGAACAAGAACTTGCTATTGAAGTTGGAACTGCTGTTGATGCATGGTGGAGTGATGGCTGGTGGGAGGGAGTTATATGTGGAGTTGATAATTGTGGTGATGATAGTGTGCAAGTCTACTTTCCTGGTGAAGGTTTGCTAATGAAAGTGTGTAAGAAGGATCTACGAATATCAAGAGATTGGTTGGGGGACGAGTGGGTTGATATTAAGGCAAAGCCTGATATAACCTCAACTATGTTCACAGTTAATAGTTTTTACACAAAGATTTCTGAGTCCCTGTCTATATCTAAAGATGCTGACTCTGTTGGTTTTGCTAATTCATGTCAAGATGTTCTTATTGGTAACAAGTCTAATGAACCAGATATTGTTGAAGAGAAACTTGTGTGTTGCGAGGGTATTGCTGATGACGTGGATCAGGTTCATGATAATAACCCCCCTTCAAAAAAATGTGCTGAAGGTGGTAATATTGAGATGCATGATTGTTCTAACAATGGTGAGGATGACGGCAAGGACAATAAAGATGATGATAATAACCAAGATTTTAATAATGATGATAGAGATATGGAGGTGTTACGGACTTCTGGAAAGGACTGTAAAGGTGCAGAACCAATGGAAGTGGCGGTTTGA 2007 0.4235 MSVSCRRFVEWKEQFVSQERGNRVVHYYLKDSHGESVLAVVGTERSLRHMFYVVSEEFLEIYAKDGSVSAGFKWRSRREVVDWLTSTLSKQYLPGDRNLSPGHNLAQAHEATDSINEVGALPTQITDDKNSDIVWSGVPWTCGKQLKHYPAFSRNGIKIAIQSFIFVMAKGENHYIAYLEDMYEDKRGQKKVRVRWFHHNQEVKGVNLVRNPHPREIFITPYSQVISAECVDGPATVLTRDHYLKCLPSFCPTSMDKIHLCFRQFRSNKVKPFDLSKLRGYYDQPILSCLHHDSIQNPEPNSIAEDEECNTGDDVKPGSKRARSGRGSPQSWIDHQGVRKLIRSQQMMVYKTFRNANYGQPDRRLLSLKKVDCQPLYNPTYKIDDKIEFLCHDSGIRGCWFRCTVLQISRKLLKVQYDDLQDEDGNGNLEEWIPTYKLAMPDKLEMRHSGRPTIRPAPAYVEQELAIEVGTAVDAWWSDGWWEGVICGVDNCGDDSVQVYFPGEGLLMKVCKKDLRISRDWLGDEWVDIKAKPDITSTMFTVNSFYTKISESLSISKDADSVGFANSCQDVLIGNKSNEPDIVEEKLVCCEGIADDVDQVHDNNPPSKKCAEGGNIEMHDCSNNGEDDGKDNKDDDNNQDFNNDDRDMEVLRTSGKDCKGAEPMEVAV* 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g1497 668 Pfam BAH domain 165 248 IPR001025 GO:0003682
Lan9g1497 668 PANTHER OS07G0607300 PROTEIN 5 644 - -
Lan9g1497 668 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 5 644 - -
Lan9g1497 668 MobiDBLite consensus disorder prediction 621 668 - -
Lan9g1497 668 SMART BAH_4 157 276 IPR001025 GO:0003682
Lan9g1497 668 SMART agenet_At_2 465 523 IPR014002 -
Lan9g1497 668 SMART agenet_At_2 379 444 IPR014002 -
Lan9g1497 668 MobiDBLite consensus disorder prediction 621 659 - -
Lan9g1497 668 Gene3D - 126 277 IPR043151 -
Lan9g1497 668 Pfam Agenet domain 384 458 IPR008395 -
Lan9g1497 668 MobiDBLite consensus disorder prediction 300 332 - -
Lan9g1497 668 ProSiteProfiles BAH domain profile. 157 276 IPR001025 GO:0003682
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g1497 Lan-Chr9 21580962 21584917 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g1497 393 521 PHD Transcription Factor Family AT5G58610 30.075 3.67e-12 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g1497 - - gmx:100306240 968.763
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan2g1355 2 24250850 24255858 Lan9g1497 9 21580962 21584917 LSH