Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g1496 ATGAAGATGGGGTTGCTGTCTTATAGAGTTGTAATAGTATTGTGTGTTATGGATTTTATGATGTGGGCTCAGGTGGATTTAGCAGAAGGTGGTGGTAGGAATTATATTAGTTGGGATGATTTGAAAGTTGATGAACAAAGATTGGCATTGAAGACCAATAATGAGATTAGAGTTATTGTGGTTGATCAATATGGAAAGGGACATTCAAAAACTGTTCAAGGAGCAGTGAATATGGTTCCAGATTACAACACTCAAAGGGTCAAAATATACATTTATCCTGGAATTTACAGAGAGAAGGTGCTTGTGCCAAACAATAAGCCTTATATTTCATTTATAGGGAAAAGAAATGAAACATCAGGTGCTGTTATTACTTGGAACAGTAAATCATCAGATAGAGGTTCAGATGGCCAAACATTAGGCACCTATGGTTCTGCAACTGTAGGAGTAGAATCAGATTATTTCTGTGCAACTCAGATCACTTTTGAGAACTCAGTAGTTGCAGCACCTGGTGGAATTGGAATGCAAGCAGTGGCATTGAGGGTAAACAGTAATAGAGCAATGTTCTATAGAGTTAAGATCAAAGGAACACAAGACACCCTTTTAGATAACTCAGGAACACATTACTTCTTCAGGTGTCTCATCCAAGGGAAAGTTGATTTTATCTTTGGAAATGCAAAATCACTATATGAGAAATGCAATCTTCAATCAATAGCTGAAAACTATGGAGCTATAGCTGCACATCACAGGAATTCACCACATCAAGATACAGGGTTTTCCTTTGTAGGATGCAGGATTGGAGGAACTGGAAATGTGTATCTTGGTAGAGCATGGGGTGACTACTCAAGAATAATATATTCTAATACTTATATGGATGATATTATTAATCCAGCAGGGTGGTCAGAGTGGAATCATCCAGAAAGAAAGTGGACTGCAGTGTTTGGTGAGTATGAATGTGAAGGAAGAGGAGCAGATAGAACACATAGGGTGCCTTGGTCAAAATCATTCACCTATGAGGAAGCAAAGCCTTTCCTAGACAAGAGATTTATTGATGGAGATCAGTGGCTTAGACTGTAG 1074 0.3836 MKMGLLSYRVVIVLCVMDFMMWAQVDLAEGGGRNYISWDDLKVDEQRLALKTNNEIRVIVVDQYGKGHSKTVQGAVNMVPDYNTQRVKIYIYPGIYREKVLVPNNKPYISFIGKRNETSGAVITWNSKSSDRGSDGQTLGTYGSATVGVESDYFCATQITFENSVVAAPGGIGMQAVALRVNSNRAMFYRVKIKGTQDTLLDNSGTHYFFRCLIQGKVDFIFGNAKSLYEKCNLQSIAENYGAIAAHHRNSPHQDTGFSFVGCRIGGTGNVYLGRAWGDYSRIIYSNTYMDDIINPAGWSEWNHPERKWTAVFGEYECEGRGADRTHRVPWSKSFTYEEAKPFLDKRFIDGDQWLRL* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g1496 357 PANTHER PECTINESTERASE QRT1 14 357 - -
Lan9g1496 357 SUPERFAMILY Pectin lyase-like 58 355 IPR011050 -
Lan9g1496 357 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 14 357 - -
Lan9g1496 357 Gene3D - 56 357 IPR012334 -
Lan9g1496 357 Pfam Pectinesterase 59 352 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g1496 Lan-Chr9 21578847 21580812 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g1496 33 308 Carbohydrate Esterase AT5G55590 58.784 2.55e-126 364
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g1496 K01051 - gmx:100813382 550.051