Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g1490 ATGTTGTTTGTTTCCTTCATGCACTCTCTCACCGAGTTTCTCCTTAAACCCATTTTCCTTCTTACGTTATCTGCTTTCTTTCATCTACTGTTACTAGTTATAGTTTTAGTGTCATGGGTTTGGAATAATTTCACAGTAGAAGCTAAACATGACTCTAAAGAGAAATCCAATGCCACCCTTTTGAAAAAGTCGTTTTTTTGTTCTCTGGGTGCTTCTGTTTTTAATCTTATTCTCTTTCTTTTTAATTGCTTCTATTGGTATACAAGTGGTTGGTCAGAAGAAAAGGTTGTGACCCTTCTGGATTTAGCACTCAAAACAGTTGCTTGGGGTGTTGTTTGTATTTGCTTGCATAAGCAATTCTTCTTATTATGTTCAGTGGACGTGGTTCATCTCTATGAAAAACATGTTTTGTTACCAGCTCAGTACTTGGTTTCTGATGTGGTATCCACTTTTGTTGGGTTACTCTTCTGTTACCTGAGCTACTTTGTGAAAAATGAGGGTGGAGATAGTAGTACACTTCAGGAACCTCTTTTAAATGTCCATAGTGATAATAATGTTGGCAATGGTTTAGGGTCAAAAGAGACCAAGGGGGATGCTACTGTTACCCCTTTCTCAAATGCTGGAATTTTCAGCATTCTTACCTTCTCTTGGGCGGGTCCTCTTGTAGCTGTTGGCAATAAGAAGACCTTGGACCTTGAGGATATCCCCCAACTTGACAGTAGGGATAGTGTAGTTGGACCTTTTCCAAAATTTAGAGATAAGCTAGAGGAAGATTGTGGTGCAATTAACAGTGTGACCACACTTAAGCTGGTGAAGTCATTAGTTTTCTCAGCATGGAAAGATATTCTTTTCACAGCTTTTCTTGCATTATTGAACACGCTTGCTTCTTATGTTGGTCCCTACCTTATTGATTCTTTTGTGCAATACCTTGATGGACAACGGCTATATGAGAATCAGGGGTATGTGTTGGTTTCTGCATTCTTTTTTGCAAAGATTATAGAGTGCCTCTCGCAAAGGCAGTGGTTATTTAGGCTGCAGCAAGTTGGAATTCGAATCCGAGCGCTACTTGTGACAATGATTTATAATAAAGCCTTGAAACTTTCAGGTCAATCAAGACAGGGCCACACTTCTGGGGAAATAATCAATTTCATGTCTGTTGATGCTGAAAGAATCGGTGACTTCAGTTGGTACATGCATGATTTGTGGTTGGTAGTTCTGCAAGTTACGCTGGCCTTGTTGATTTTGTATAAAAACCTTGGGCTTGCTTCAATTGCTGCTTTTGTTGCAACTATCCTTGTAATGTTGGCAAATGCTCCCTTGGGATTATTGCAAGAGAAGTTTCAAAGGAAGTTGATGGAGTCAAAAGATACAAGAATGAAGGCAACATCAGAGATTTTGAGGAATATGAAGATCCTCAAACTACAAGGATGGGAAATGAAGTTTCTGTCTAAGATAAATGTGCTCAGAAACACTGAGCAAGGCTGGTTACAAAAATATCTTTATACTTCAGCCATGACTACATTTTTGTTTTGGGGTGCCCCTACACTTGTATCTGTGGTTACTTTTGGTACTTGTATGCTTATAGGGATCCCACTCGAATCAGGGAAGATCTTGTCTGCACTTGCAACATTCAGGATTCTTCAAGAGCCCATTTATAGTCTTCCGGATACAATTTCAATGGTTGCACAAACTAAGGTTTCTCTTGATAGGATTTCATCATTCCTTTGTCTTCAGGACTTGCAGTCTGATGCTGTAGAGAGGCTTCGTCCGGGTAGTTCGGATACAGCAATTGAAATAGTTGGTGGAAATTTCTCCTGGGATATAACTTCCTCGAGTACAACACTGAAAAACATAAATCTTGCAGTTTCTCACGGCATGAGGGTTGCTGTTTGTGGCACTGTTGGATCAGGCAAGTCTACTTTACTTTCTTGTATGTTGGGAGAAGTACCAAAGATATCAGGAATCCTGAAGGTGTGTGGATCAAAGGCATATGTTGCTCAATCACCATGGGTACAAAGTGGCAAGATAGAGGATAATATATTGTTTGGTAAGGAGATGGATAGAGAATGGTATGAGAAGGTACTTGAAGCCTGTTCCCTCAAAAAGGATCTGGATATTTTACCATTTGGTGATCAAACAATTATCGGAGAGCGTGGAATAAATTTGAGCGGGGGACAAAAGCAAAGAATACAAATTGCACGTGCTCTTTACCGAGATGCTGATATATATTTGTTTGATGATCCTTTTAGTGCTGTGGATGCTCATACAGGATCTCACCTCTTTAAGGAATGTTTGCTGGGCCTTTTAAGTTCAAAGACTGTGGTTTATGTCACTCATCAAGTAGAGTTCTTACCTGCTGCTGACCTTATATTGGTCATGAAGGATGGGAAAATTACTCAATGTGGGAAGTATGCTGATCTGCTTAACAGTGGGACTGATTTTATGGAACTTGTTGGTGCACATCAACAAGCGATGTCGGCACTTAATTCGCTAGATGGAAGGACAGAATCTATAATTACCTTGGAGCCAGATGTGAATGCCTCTGGTGCTCTTGATGTTAAAGAAAAAGATGCAAACAAAGACATGCAAAATGGTAAAACAGATGACACAAGTGAGCCATTAGGCCAGCTTGTTCAAGAAGAAGAAAGAGAGAAAGGTAAAGTTGGCCTTTCAGTCTATTGGAATTATATCACAACGGCATTCGGAGGAGCTCTTGTTCCGTTAATATTGTTGTCTCAGACTATCTTTCAAGCTCTTCAAATTGGAAGCAACTATTGGATGGCTTGGGCAACTCCCATCTCATCCGATGTGGAGCCACCCGTTCGAGGAACGACTCTTATAGCAGTCTATGTCGGTTTGTCCATTGGAAGTTCTTTCTGCATCCTTGCCAGAGAAATATTTGTTGTCATAGCTGGTTATAAGACATCTACTATACTCTTCAATAAGATGCACAACTCCCTTTTCCGTGCCGCGATGTCATTTTTTGATTCCACTCCAAGTGGACGAATCCTTAACAGAGCTTCTACTGACCAAAGTGCAGTGGATACAGACATTCCTATTCAAATTGGTTCATTTGCTTTCTCATTTATCGAGCTTTTGGGAATTATAGCAGTGATGTCTCAGGTTGCATGGCAAGTTTTCATTGTCTTTATACCTGTGATAGCAATCAGCATCTGGTATCAGCAATATTATATACCATCAGCAAGAGAACTATCACGTTTAGTTGGAGTGTGCAAAGCCCCAATCATTCAACACTTCGCTGAAACAATTTCTGGTACATCAACTATTAGAAGCTTTGATCAGCAGTCAAGATTTCAGGAATCAAATATGAAACTGACTGATAGATATTCTCGGCCGGAGTTCAATATTGCTGGTGCTATGGAGTGGTTGTGCTTCCGCCTAGATATGTTGTCTTCTATCACATTTGCCTTTTGCTTGATATTATTGATATCTGTTCCGCAGGGAGTAATAGATCCAGGCATTTCTGGTTTAGCTGTTACCTATGGACTTAATTTGAATGCAATACAAGCTTGGATGATATGGAACCTTTGCAACTTGGAGAACAAAATTATATCGGTAGAAAGAATACTGCAATATACTAGCATTCCTAGTGAGCCTTCCCTTGTTGTTGAAGAAAGTCGGCCAGACCCCTCTTGGCCATCTTATGGCGAGGTTGATATACATGACTTGCAGGTTCGTTATGCGCCACATCTCCCACTTGTGCTGTGTGGGGTCACATGCACATTTCGTGGAGGACTGAAAACTGGCATCGTTGGGAGAACTGGAAGCGGTAAATCAACTCTCATACAAACACTTTTCCGAATCGTTGAACCTACTGCTGGACAAGTTATGATTGACGGCATCAACATCTCTTCCATTGGACTTCACGATTTGAGGTCTAGACTAAGTATTATTCCTCAAGATCCAACCATGTTTGAGGGGACAGTGAGGAATAATCTAGACCCACTAGAAGAGTACTCGGATGAACAAATTTGGGAGGCCCTAGATAAGTGTCAACTTGGAGATGAAGTTAGAAAGAAAGAAGGAAAGCTAGACTCTGCGGTTAGTGAGAATGGTGAGAACTGGAGCATGGGTCAGAGGCAGTTGGTGTGCCTTGGTAGGGTGCTGCTTAAGAAAAGCAAGATTTTGGTGCTTGATGAAGCCACTGCATCAGTTGATACATCTACAGATAATTTGATTCAGCAAACTCTTAGGAAACATTTCTCTAACTCTACAGTCATTACCATTGCGCATCGAATAACTTCTGTTCTTGATGGTGATATGGTTTTGCTTCTTAGTCAAGGACTTATTGAGGAGTATGGGTCTCCAACAACATTGCTAGAGGATAAATCATCATCTTTTGCTGCACTTGTTGGAGAGTATACCATGAGGTCTAGCTCTACTTTTGAGAAATCTGTTGATCACTGA 4428 0.4061 MLFVSFMHSLTEFLLKPIFLLTLSAFFHLLLLVIVLVSWVWNNFTVEAKHDSKEKSNATLLKKSFFCSLGASVFNLILFLFNCFYWYTSGWSEEKVVTLLDLALKTVAWGVVCICLHKQFFLLCSVDVVHLYEKHVLLPAQYLVSDVVSTFVGLLFCYLSYFVKNEGGDSSTLQEPLLNVHSDNNVGNGLGSKETKGDATVTPFSNAGIFSILTFSWAGPLVAVGNKKTLDLEDIPQLDSRDSVVGPFPKFRDKLEEDCGAINSVTTLKLVKSLVFSAWKDILFTAFLALLNTLASYVGPYLIDSFVQYLDGQRLYENQGYVLVSAFFFAKIIECLSQRQWLFRLQQVGIRIRALLVTMIYNKALKLSGQSRQGHTSGEIINFMSVDAERIGDFSWYMHDLWLVVLQVTLALLILYKNLGLASIAAFVATILVMLANAPLGLLQEKFQRKLMESKDTRMKATSEILRNMKILKLQGWEMKFLSKINVLRNTEQGWLQKYLYTSAMTTFLFWGAPTLVSVVTFGTCMLIGIPLESGKILSALATFRILQEPIYSLPDTISMVAQTKVSLDRISSFLCLQDLQSDAVERLRPGSSDTAIEIVGGNFSWDITSSSTTLKNINLAVSHGMRVAVCGTVGSGKSTLLSCMLGEVPKISGILKVCGSKAYVAQSPWVQSGKIEDNILFGKEMDREWYEKVLEACSLKKDLDILPFGDQTIIGERGINLSGGQKQRIQIARALYRDADIYLFDDPFSAVDAHTGSHLFKECLLGLLSSKTVVYVTHQVEFLPAADLILVMKDGKITQCGKYADLLNSGTDFMELVGAHQQAMSALNSLDGRTESIITLEPDVNASGALDVKEKDANKDMQNGKTDDTSEPLGQLVQEEEREKGKVGLSVYWNYITTAFGGALVPLILLSQTIFQALQIGSNYWMAWATPISSDVEPPVRGTTLIAVYVGLSIGSSFCILAREIFVVIAGYKTSTILFNKMHNSLFRAAMSFFDSTPSGRILNRASTDQSAVDTDIPIQIGSFAFSFIELLGIIAVMSQVAWQVFIVFIPVIAISIWYQQYYIPSARELSRLVGVCKAPIIQHFAETISGTSTIRSFDQQSRFQESNMKLTDRYSRPEFNIAGAMEWLCFRLDMLSSITFAFCLILLISVPQGVIDPGISGLAVTYGLNLNAIQAWMIWNLCNLENKIISVERILQYTSIPSEPSLVVEESRPDPSWPSYGEVDIHDLQVRYAPHLPLVLCGVTCTFRGGLKTGIVGRTGSGKSTLIQTLFRIVEPTAGQVMIDGINISSIGLHDLRSRLSIIPQDPTMFEGTVRNNLDPLEEYSDEQIWEALDKCQLGDEVRKKEGKLDSAVSENGENWSMGQRQLVCLGRVLLKKSKILVLDEATASVDTSTDNLIQQTLRKHFSNSTVITIAHRITSVLDGDMVLLLSQGLIEEYGSPTTLLEDKSSSFAALVGEYTMRSSSTFEKSVDH* 1476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g1490 1475 Pfam ABC transporter transmembrane region 283 550 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lan9g1490 1475 Pfam ABC transporter transmembrane region 908 1151 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lan9g1490 1475 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 283 563 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lan9g1490 1475 Gene3D - 1208 1460 IPR027417 -
Lan9g1490 1475 SUPERFAMILY ABC transporter transmembrane region 273 575 IPR036640 GO:0005524|GO:0016021
Lan9g1490 1475 CDD ABC_6TM_ABCC_D1 284 571 IPR044746 GO:0140359
Lan9g1490 1475 CDD ABC_6TM_ABCC_D2 906 1200 IPR044726 GO:0140359
Lan9g1490 1475 Gene3D ABC transporter type 1, transmembrane domain 871 1206 IPR036640 GO:0005524|GO:0016021
Lan9g1490 1475 Gene3D ABC transporter type 1, transmembrane domain 261 578 IPR036640 GO:0005524|GO:0016021
Lan9g1490 1475 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 596 819 IPR027417 -
Lan9g1490 1475 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1217 1451 IPR027417 -
Lan9g1490 1475 ProSitePatterns ABC transporters family signature. 722 736 IPR017871 GO:0005524
Lan9g1490 1475 SMART AAA_5 1251 1443 IPR003593 -
Lan9g1490 1475 SMART AAA_5 624 797 IPR003593 -
Lan9g1490 1475 PANTHER MULTIDRUG RESISTANCE PROTEIN ABC TRANSPORTER FAMILY PROTEIN 104 1471 - -
Lan9g1490 1475 Pfam ABC transporter 615 749 IPR003439 GO:0005524
Lan9g1490 1475 Pfam ABC transporter 1244 1390 IPR003439 GO:0005524
Lan9g1490 1475 CDD ABCC_MRP_domain2 1223 1443 - -
Lan9g1490 1475 Gene3D - 579 835 IPR027417 -
Lan9g1490 1475 MobiDBLite consensus disorder prediction 854 873 - -
Lan9g1490 1475 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 104 1471 - -
Lan9g1490 1475 SUPERFAMILY ABC transporter transmembrane region 907 1205 IPR036640 GO:0005524|GO:0016021
Lan9g1490 1475 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1227 1459 IPR003439 GO:0005524
Lan9g1490 1475 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 908 1188 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lan9g1490 1475 CDD ABCC_MRP_domain1 597 797 - -
Lan9g1490 1475 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 597 820 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g1490 Lan-Chr9 21550690 21556772 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g1490 597 837 Calmodulin-binding Proteins AT2G36910 29.885 4.82e-25 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g1490 - K05666 gmx:100777836 2363.96