Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g1467 ATGGAAGGAATTATCGTGAGACGAGTCATTCCCTCGGATAATAGTTGCCTCTTTAATGCAGTTGGATATGTTATGGATCATGATTCAAAAAAGGCTTCTGAGTTTAGACAGGTTATTGCTGCCACAGTAGCAAGTGATCCAGAGAAATATTCTGAAGCATTTTTGGGGAAGCCAAATGCAGAGTATTGTAATTGGATTCTTGACCCAGAGAAGTGGGGAGGTGCAATTGAACTTTCAATATTAGCAGACTATTGTGGACGTGAAGTTGCAGCGTATGATATCCAGACAACACGATGTGATTTGTATGGTCAGGGAAAAAACTATTCTGAAAGAGTGATGCTGATTTATGATGGTCTCCACTACGACGCTTTAGCTATGTCTCCCTTTGATGGGGCTCCTGAGGAGTTTGATCAAACCATATTTGCTGTACATAAAGACAGAACCATTGGACCTGTTGAGGGGCTTGCCCTTAATTTTGTGAAGGAGCAACAAAGGAAACGGAGTTACACCGACACCTCGAACTTTACTCTGCGCTGCGGGGTGTGCCAAATTGGAGTAATTGGTCAGAAGGAAGCAGTGGAGCATGCACAAGCAACTGGTCATGTTAACTTCCAAGAATATAGATGA 627 0.4274 MEGIIVRRVIPSDNSCLFNAVGYVMDHDSKKASEFRQVIAATVASDPEKYSEAFLGKPNAEYCNWILDPEKWGGAIELSILADYCGREVAAYDIQTTRCDLYGQGKNYSERVMLIYDGLHYDALAMSPFDGAPEEFDQTIFAVHKDRTIGPVEGLALNFVKEQQRKRSYTDTSNFTLRCGVCQIGVIGQKEAVEHAQATGHVNFQEYR* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g1467 208 Pfam OTU-like cysteine protease 12 97 IPR003323 -
Lan9g1467 208 SUPERFAMILY Cysteine proteinases 7 124 IPR038765 -
Lan9g1467 208 ProSiteProfiles OTU domain profile. 5 127 IPR003323 -
Lan9g1467 208 PANTHER UBIQUITIN THIOESTERASE OTU1 6 206 - -
Lan9g1467 208 PANTHER HIV-INDUCED PROTEIN-7-LIKE PROTEASE 6 206 IPR039138 GO:0004843|GO:0016579|GO:0030433|GO:0101005
Lan9g1467 208 Gene3D - 1 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g1467 Lan-Chr9 21405936 21410606 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g1467 1 208 C2H2 Transcription Factor Family AT1G50670 82.692 2.01e-132 369
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g1467 K13719 - zju:107432084 393.275