Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g1459 ATGATTTGCACTGTGAAACAACCTGGTATAGTGATCCGAGGTTCTGGTCTTGTTTTCCGAGAAAAGGGTACAACACTTCCTCCACTTCAATCATGTTCCTTTGTCTTCAGAGAAAAACCTCAGAGATATCTGATTTCAGTGCAAAAGCCACTGCACCTTTCTTCTGTTGTTGGTGTTGGGAATGTTATTAAGCCTGTGAGATGTGAAAAAAGTGTTTTTGTTTGTGGAGCTTATGAGGCAGATAGATCAGAGGTTGAAGCAACTGAGGCTCCATCAGAGGCTGCTAAGAAGGTGAAAATTGGGATATATTTTGCAACATGGTGGGCTTTGAATGTGGTCTTCAATATCTATAACAAGAAGGTGTTGAATGCTTACCCTTACCCTTGGCTTACTTCAACTCTCTCACTTGCATGTGGCTCTCTTATGATGTTGATTTCATGGGCCACAAGGATTGCTGAGGCTCCTAAGACTGATCTTGAGTTTTGGAAGTCTTTGTTCCCTGTTGCTGTTGCACATACAATAGGGCATGTAGCTGCAACTGTTAGTATGTCAAAAGTTGCAGTATCATTCACCCATATTATCAAGAGTGGAGAGCCTGCTTTCAGTGTTCTGGTTTCCAGATTTATATTGGGTGAAACCTTCCCGGTGCCAGTCTATCTGTCTTTAGTTCCAATTATTGGTGGATGTGCTCTTGCTGCTGTTACTGAGCTCAATTTCAACATGATTGGTTTTATGGGGGCTATGATATCGAATTTGGCATTTGTATTCCGTAATATCTTTTCGAAAAAGGGCATGAAGGGAAAGTCAGTCAGCGGAATGAATTACTATGCTTGTTTATCTATTTTGTCTCTGGTAATTCTCACACCATTTGCAATTGCTGTGGAGGGACCACAGATGTGGGCAGCTGGATATCAAACAGCCCTCTCTCAAATTGGACCCCAATTTTTATGGTGGGTGGCAGCTCAGAGTGTATTTTATCATCTGTACAATCAGGTGTCATACATGTCTCTGGATGAGATCTCTCCCTTGACATTTAGCATTGGAAACACCATGAAACGTATATCTGTCATAGTTTCTTCAATCATTATCTTCCACACACCGGTTCAGCCCGTGAATGCTCTTGGAGCTGCTATTGCCGTCCTTGGAACCTTCTTGTATTCACAGGCAAAGCAATAG 1176 0.4209 MICTVKQPGIVIRGSGLVFREKGTTLPPLQSCSFVFREKPQRYLISVQKPLHLSSVVGVGNVIKPVRCEKSVFVCGAYEADRSEVEATEAPSEAAKKVKIGIYFATWWALNVVFNIYNKKVLNAYPYPWLTSTLSLACGSLMMLISWATRIAEAPKTDLEFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFILGETFPVPVYLSLVPIIGGCALAAVTELNFNMIGFMGAMISNLAFVFRNIFSKKGMKGKSVSGMNYYACLSILSLVILTPFAIAVEGPQMWAAGYQTALSQIGPQFLWWVAAQSVFYHLYNQVSYMSLDEISPLTFSIGNTMKRISVIVSSIIIFHTPVQPVNALGAAIAVLGTFLYSQAKQ* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g1459 391 Pfam Triose-phosphate Transporter family 99 387 IPR004853 -
Lan9g1459 391 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 99 390 IPR004696 GO:0016021|GO:0022857|GO:0055085
Lan9g1459 391 SUPERFAMILY Multidrug resistance efflux transporter EmrE 142 234 - -
Lan9g1459 391 PANTHER SOLUTE CARRIER FAMILY 35 36 390 - -
Lan9g1459 391 PANTHER GLUCOSE-6-PHOSPHATE/PHOSPHATE TRANSLOCATOR 2, CHLOROPLASTIC 36 390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g1459 Lan-Chr9 21365639 21369615 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g1459 1 390 Antiporters AT5G54800 76.866 0.0 580
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g1459 K15283 - gmx:100801832 630.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan2g1289 2 23829605 23833015 Lan9g1459 9 21365639 21369615 LSH
Lan2g1289 2 23829605 23833015 Lan9g1459 9 21365639 21369615 PCT
Lan9g1459 9 21365639 21369615 Lan2g1289 2 23829605 23833015 PCT
Lan9g1459 9 21365639 21369615 Lan9g1459 9 21365639 21369615 PCT