Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g1456 ATGGCAACTGAAAATTCGAATGTTTCGAAGGCTGAAGAATTCAAACTCCTTGCCAATAAAGCATTTGGTGCCCGCAAATATGCTCAAGCTATTGAGCTATATACAAAAGCAATTGAACTGAACAGTCAAAATGCAGTTTACTTGGCCAATCGTGCATTTGCCCATCTCCGACGTGAGGAATATGGTAGTGCAATACAAGATGCTACAGAAGCTATTGAAGTTGATCCTAAATATTCAAAGGGTTATTACAGGCGAGGTACTGCTCATCTTGCCATGGGAAAATTCAAGGAAGCACTGAAAGATTTTCAGCAGGTCAAGAAACTGTGCCCAAATGATCCTGATGCAACAAAGAAATTGAAGGAATGTGAAAAAGCTGTTATGAAACTTAAATTTGAAGAAGCAATTGCTGTGCCAGAATCTCAAAGGCATTCAGTTGCTGAATCCATAGATTTTCACACTATAGATGTGGAGCCACAATATTCAGGAGCAAGAATAGAGGGGGATGCTGTTACTTTAGAGTTTGTGAAGAAAATGATGGATGATTTCAAGAATCAGAAGTTCTTACATAAACGTTATGCATTCCAGATTGTTTTGCAAACACGAGAGATTTTGCGAGCTTTGCCTTCTCTTGTGGATATAAATGTACCTAATGGCAAACATTTTACTGTTTGTGGTGATGTGCATGGCCAGTACTATGATCTTGTGAATATTTTCGAGCTTAATGGGCTTCCTTCAGAAGATAATCCTTATCTATTTAATGGTGACTTTGTGGATAGAGGATCTTTTTCTTTGGAAGTCATCCTCACTCTGTTTGCATTGAAGTGCATGTCTCCATCAGCCTTGTATCTAGCTAGAGGAAATCATGAGAGCAAGAACATGAACAAGATATATGGTTTTGAGGGCGAGGTGCGCTCAAAATTGAATGAAACATTCGTGGAACTGTTTGCGGAAGTATTCTGCAGTTTACCTCTGGCTCATGTGATAAATGAGAAAGTTTTTGTAGTTCATGGAGGTCTTTTTAGTGTTGATGGGGTCAAACTCTCTGATATCCGAGCAATTGACCGGTTTTGTGAGCCTCCAGAAGAAGGTTAG 1092 0.3938 MATENSNVSKAEEFKLLANKAFGARKYAQAIELYTKAIELNSQNAVYLANRAFAHLRREEYGSAIQDATEAIEVDPKYSKGYYRRGTAHLAMGKFKEALKDFQQVKKLCPNDPDATKKLKECEKAVMKLKFEEAIAVPESQRHSVAESIDFHTIDVEPQYSGARIEGDAVTLEFVKKMMDDFKNQKFLHKRYAFQIVLQTREILRALPSLVDINVPNGKHFTVCGDVHGQYYDLVNIFELNGLPSEDNPYLFNGDFVDRGSFSLEVILTLFALKCMSPSALYLARGNHESKNMNKIYGFEGEVRSKLNETFVELFAEVFCSLPLAHVINEKVFVVHGGLFSVDGVKLSDIRAIDRFCEPPEEG* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g1456 363 PIRSF PPPtase_5 1 363 - -
Lan9g1456 363 PRINTS Serine/threonine phosphatase family signature 220 247 IPR006186 GO:0016787
Lan9g1456 363 PRINTS Serine/threonine phosphatase family signature 250 277 IPR006186 GO:0016787
Lan9g1456 363 PRINTS Serine/threonine phosphatase family signature 283 307 IPR006186 GO:0016787
Lan9g1456 363 PRINTS Serine/threonine phosphatase family signature 317 343 IPR006186 GO:0016787
Lan9g1456 363 PRINTS Serine/threonine phosphatase family signature 347 363 IPR006186 GO:0016787
Lan9g1456 363 ProSiteProfiles TPR repeat profile. 79 112 IPR019734 GO:0005515
Lan9g1456 363 Pfam Tetratricopeptide repeat 17 78 - -
Lan9g1456 363 PANTHER BNAC09G39960D PROTEIN 11 363 - -
Lan9g1456 363 SUPERFAMILY Metallo-dependent phosphatases 169 363 IPR029052 -
Lan9g1456 363 Pfam Tetratricopeptide repeat 80 112 IPR001440 GO:0005515
Lan9g1456 363 SMART pp2a_7 188 363 IPR006186 GO:0016787
Lan9g1456 363 Pfam Calcineurin-like phosphoesterase 220 362 IPR004843 GO:0016787
Lan9g1456 363 ProSiteProfiles TPR repeat profile. 11 44 IPR019734 GO:0005515
Lan9g1456 363 Pfam PPP5 TPR repeat region 119 212 IPR013235 -
Lan9g1456 363 Gene3D Tetratricopeptide repeat domain 1 138 IPR011990 GO:0005515
Lan9g1456 363 SUPERFAMILY TPR-like 7 137 IPR011990 GO:0005515
Lan9g1456 363 SMART tpr_5 45 78 IPR019734 GO:0005515
Lan9g1456 363 SMART tpr_5 11 44 IPR019734 GO:0005515
Lan9g1456 363 SMART tpr_5 79 112 IPR019734 GO:0005515
Lan9g1456 363 Gene3D - 139 363 IPR029052 -
Lan9g1456 363 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED 11 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g1456 Lan-Chr9 21351790 21355500 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g1456 166 340 Calmodulin-binding Proteins AT5G63870 34.921 5.75e-30 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g1456 K04460 - csin:114309579 647.506