Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g1450 ATGCAACAGCTAGATCACAGAAAAAAGAGTTCAACAGAGATGGAGTTCTTCTCCGAATATGGTGATGCCAACCGTTACAAAATTCAAGAAGTCATTGGGAAGGGAAGTTATGGTGTTGTTTGTTCAGCCATTGATACTCACACTGGTGAAAAGGTAGCAATAAAGAAGATTCACGATATATTTGAGCATATATCTGATGCTGCGCGGATTCTTCGTGAGATAAAGTTGCTTCGACTTCTACGCCATCCCGACATTGTTGAAATTAAACACATTATGCTTCCTCCTTCTAGGAGGGACTTCAAAGATATTTACGTTGTTTTTGAGCTCATGGAGTCTGATCTGCATCAAGTCATTAAAGCCAATGATGACCTAACGAAAGAGCACTATCAGTTTTTTCTTTACCAATTACTTCGAGCATTGAAGTATATTCACACCGGGAATGTCTATCACCGAGACTTGAAGCCAAAGAATATATTGGCGAATGCAAACTGTAAACTTAAAATCTGTGACTTTGGGTTAGCTAGAGTTGCTTTCAGTGACACACCAACTACTGTGTTTTGGACGGACTATGTTGCTACAAGGTGGTATAGAGCCCCAGAGCTCTGTGGATCATTTTACTCAAAGTATACACCAGCAATTGATATTTGGAGCATAGGTTGCATCTTCGCTGAAGTATTAATAGGAAAGCCACTTTTTCCCGGAAAAAATGTTGTCCACCAGTTAGATTTAATGACAGATCTGCTTGGGACTCCTTCACTGGATGCTATATCCAGGGTACGCAATGATAAGGCGAGGAGATACCTAACTAGAATAAGGAAGAAGCAGCCTGTACCGTTTGCAAAAAAATTTCCTAATGTTGATCCTTTAGCGCTTCGACTACTGGAAAGGTTGCTTGCTTTTGATCCAAAAGACCGGCCTACTGCGGAAGAGGCATTAGGTGATCCTTACTTCAAGGGACTCTCAAGAGTTGAGAGGGAACCATCCTGCCAGCCTATTACAAAAATGGAGTTTGAATTTGAGAGACGAAGAGTCACAAATGAAGAAATCCGGGAGCTGATTTTCCGTGAGATTCTAGAGTACCATCCTCAACTACTGAAAGACTACATAAAAGGAACAGAGAGAACTAATTTTCTTTATCCAAGTGCTGTTGATCAATTCAAAAAGCAGTTTGCTCATCTTGAAGAAAATGGTGGTAAAAACACTTCAGTGATACCACTTGAAAGAAAGCATGTATCACTTCCCAGGTCAACAATTGTACATTCGAATATGGTACCACCAAAACAGCATTTCAATATTGCTTCCTCCAAAAACCGTCAAATAGCTGAAGAATATAATAGTAATCCCAGAGATACAGAAAATCCTGCAGCAAGGCCCATTCAGGGAATGCAAAGAATTCCACTGGCAAAACCTGGTAACGTTGTTGGTCCGGTTGTTCCATATGAGTATGCGAGTGTCGTCAAGGATTCTTATGATCCAAGGAGATTTACAAGAGGTTCTGTTCTTCCTTCTCAATCTATAGCCCCAACATATTATTATCAAAGATCTAGCTCTGGGAATCAAGAAAAGGCAGCAGCAATAGAAACTGATAAGGGTGTGTCTGTACAAGCAAAACATGGTCAACAGCAGTATGGTGTCACTGCCAAAATAGCACCAGAAATAGATATTAATATTGACTCCAACCCCTTTTTTATGACAAGGGCAGGAGTGAACAAGATAGAAGAACAGGATGATCGGATTGCAATCGACCGAAACTTGTTGCAGCCAAAGGCTCAATATGGTAGGATCAATGCAGCTTCTGGTGCCACTGCTCATAGAAAAGTTGGACCTGTTCAGTATGGTATGACAACAAGGATGTTCTAG 1860 0.4075 MQQLDHRKKSSTEMEFFSEYGDANRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRDFKDIYVVFELMESDLHQVIKANDDLTKEHYQFFLYQLLRALKYIHTGNVYHRDLKPKNILANANCKLKICDFGLARVAFSDTPTTVFWTDYVATRWYRAPELCGSFYSKYTPAIDIWSIGCIFAEVLIGKPLFPGKNVVHQLDLMTDLLGTPSLDAISRVRNDKARRYLTRIRKKQPVPFAKKFPNVDPLALRLLERLLAFDPKDRPTAEEALGDPYFKGLSRVEREPSCQPITKMEFEFERRRVTNEEIRELIFREILEYHPQLLKDYIKGTERTNFLYPSAVDQFKKQFAHLEENGGKNTSVIPLERKHVSLPRSTIVHSNMVPPKQHFNIASSKNRQIAEEYNSNPRDTENPAARPIQGMQRIPLAKPGNVVGPVVPYEYASVVKDSYDPRRFTRGSVLPSQSIAPTYYYQRSSSGNQEKAAAIETDKGVSVQAKHGQQQYGVTAKIAPEIDINIDSNPFFMTRAGVNKIEEQDDRIAIDRNLLQPKAQYGRINAASGATAHRKVGPVQYGMTTRMF* 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g1450 619 ProSiteProfiles Protein kinase domain profile. 26 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan9g1450 619 ProSitePatterns MAP kinase signature. 61 164 IPR003527 GO:0004707|GO:0005524|GO:0006468
Lan9g1450 619 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 10 495 - -
Lan9g1450 619 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 10 495 - -
Lan9g1450 619 CDD STKc_TDY_MAPK 25 362 - -
Lan9g1450 619 Gene3D Transferase(Phosphotransferase) domain 1 112 340 - -
Lan9g1450 619 Gene3D Phosphorylase Kinase; domain 1 41 363 - -
Lan9g1450 619 SMART serkin_6 26 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan9g1450 619 ProSitePatterns Protein kinases ATP-binding region signature. 32 56 IPR017441 GO:0005524
Lan9g1450 619 SUPERFAMILY Protein kinase-like (PK-like) 22 321 IPR011009 -
Lan9g1450 619 Pfam Protein kinase domain 26 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g1450 Lan-Chr9 21314044 21319586 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g1450 1 424 MAP Kinase Gene Family AT2G42880 87.736 0.0 775
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Lan9g1450 Pkinase 1.7e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g1450 - - gmx:100811788 1051.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan2g1275 2 23726758 23732448 Lan9g1450 9 21314044 21319586 LSH
Lan11g0113 11 644271 649914 Lan9g1450 9 21314044 21319586 LSH
Lan2g1275 2 23726758 23732448 Lan9g1450 9 21314044 21319586 PCT
Lan9g1450 9 21314044 21319586 Lan2g1275 2 23726758 23732448 PCT
Lan9g1450 9 21314044 21319586 Lan11g0113 11 644271 649914 PCT
Lan9g1450 9 21314044 21319586 Lan9g1450 9 21314044 21319586 PCT
Lan11g0113 11 644271 649914 Lan9g1450 9 21314044 21319586 PCT