Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g1447 ATGGAGTTCCCAATGATGCTCCTAAGGCTTATAAACTTGGTCTTGTATAAGCTTCTTGCTAACTCATGTTATAGAGCAGCAAGGAAAGTTAAAAGTTATGGCTTTCATTTTGGATATTTGTCATCCAAAACACCACACCAACCTTCTTTTCCTAGTGTTATCAAATGTGATTTGGAGGGTAGAGTGTCACAAACACTTATTTGTGATATTCATAATGTGCTATTGAGATCAAACTCTTTCTTCCCTTATTTCATGCTTGTTGCCTTTGAAGGTGGTAGCATTCTCAGGGCACTTCTTTTACTTCTATCTTGTCCTATACTTTGGATTTTAGACTATGAGCAGAAGCTTAAAGTCATGACTTTCATCACCTTTTGTGGCTTAAAAATAAATAACATGGAAAATATTTCAAGGGCAGTTTTGCCCAAGTTTTATTTGGAGAATCTTAACCTTCATGCTTATGAGGTTCTTGCTTCAGCAGGATCTAAAGTTGTGTTCACAAGTGTGCCTAGAGTGATGGTAGAAGGGTTTCTGAAGGAGTATTTGAGTGTTGGTGATGTTATAGGGACAGAGTTAAATACTATTGGTAGCTACTTCACTGGTTTGATCTCTGCTTCTGGTTTACTTGTGAAGCATAGAGCCCTCAGGGATTATTTTGGAGATAGAAAACCTGATATTGGGATTGGAAGCTCAAGTGTCCATGATCACCTTTTCATCTCCCTTTGCAAGGAAGCTTATGTGGTGAACAATGAAGAAGGCAAGAACAACCCAAGCTCAGTGATGCCAAGGAACAAATATCCAAAGCCTCTAATATTTCATGATGGAAGATTAGCATTCTTACCTACTCCTTCAGCAACTCTCTACATGTTCTTGTGGCTTCCAATTGGAATTCTTTTAGCCATTTATAGAATCCTTCTTGGTATTCTCCTTCCTTACAAATGTGCCATGACATTAGGAGTTTGGAGTGGTATAGTACTAAATGTCAAAGGTTACATCCCTCAGAAATCAGAGAAAAACAAAGGGGTTCTCTATGTTTGCACACATAGGACACTCTTGGATCCTGTTTTCCTAAGCACATGTTTGGCAAGGCCTTTGACTGCAGTAACTTACAGTGTAAGCAAGGTGTCTGAGTTCATAGCACCAATTAGAACAGTGAGATTAACTAGGGACAGAAAAAAAGATGGTGAAACCATGCAAAGGCTACTAAGGGAAGGTGATTTGGTAGTGTGTCCTGAAGGAACAACTTGTAGGGAGCCATATCTATTAAGGTTCAGCTCATTGTTTGCTGAAATGGCTGATGAGATTGTACCTGTGGCTATGAATGTTAATGTGAGCATGTTCTATGGGACCACAGCTAGTGGACTTAAATGTTTGGACCCATTATTCTTTTTTATGAATCCTAGGCCTAGTTATCACATTCAAATCCTTGGAAAAGTTCCTAAAGAGTTTACTTGTGCTGGTGGATGGTCTAGTTTTGAAGTGGCAAATTATATACAGAGATTGTTGGGTGATGCTTTGGGATTTGAGTGCACCACTTTGAATAGAAGGGATAAGTATATGATGCTAGCAGGGAATGAAGGGATTGTTAAAGATGACAAAAGTAGAAAATGCTGTTGA 1614 0.3879 MEFPMMLLRLINLVLYKLLANSCYRAARKVKSYGFHFGYLSSKTPHQPSFPSVIKCDLEGRVSQTLICDIHNVLLRSNSFFPYFMLVAFEGGSILRALLLLLSCPILWILDYEQKLKVMTFITFCGLKINNMENISRAVLPKFYLENLNLHAYEVLASAGSKVVFTSVPRVMVEGFLKEYLSVGDVIGTELNTIGSYFTGLISASGLLVKHRALRDYFGDRKPDIGIGSSSVHDHLFISLCKEAYVVNNEEGKNNPSSVMPRNKYPKPLIFHDGRLAFLPTPSATLYMFLWLPIGILLAIYRILLGILLPYKCAMTLGVWSGIVLNVKGYIPQKSEKNKGVLYVCTHRTLLDPVFLSTCLARPLTAVTYSVSKVSEFIAPIRTVRLTRDRKKDGETMQRLLREGDLVVCPEGTTCREPYLLRFSSLFAEMADEIVPVAMNVNVSMFYGTTASGLKCLDPLFFFMNPRPSYHIQILGKVPKEFTCAGGWSSFEVANYIQRLLGDALGFECTTLNRRDKYMMLAGNEGIVKDDKSRKCC* 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g1447 537 PANTHER GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 1 19 531 - -
Lan9g1447 537 Pfam Acyltransferase 332 434 IPR002123 GO:0016746
Lan9g1447 537 SMART plsc_2 341 442 IPR002123 GO:0016746
Lan9g1447 537 PANTHER ANCIENT UBIQUITOUS PROTEIN 19 531 - -
Lan9g1447 537 CDD LPLAT 327 501 - -
Lan9g1447 537 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 265 529 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g1447 Lan-Chr9 21296033 21298343 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g1447 1 529 Acyl Lipid Metabolism Gene Families AT1G06520 57.966 0.0 647
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g1447 K13508 - gmx:100803875 905.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan2g1272 2 23706791 23708677 Lan9g1447 9 21296033 21298343 LSH
Lan11g0279 11 1827994 1830502 Lan9g1447 9 21296033 21298343 LSH
Lan9g1447 9 21296033 21298343 Lan2g1324 2 24057034 24060772 PCT
Lan9g1447 9 21296033 21298343 Lan11g0072 11 415694 418565 PCT
Lan2g1272 2 23706791 23708677 Lan9g1447 9 21296033 21298343 PCT
Lan11g0279 11 1827994 1830502 Lan9g1447 9 21296033 21298343 PCT
Lan9g1447 9 21296033 21298343 Lan2g1272 2 23706791 23708677 PCT
Lan9g1447 9 21296033 21298343 Lan9g1447 9 21296033 21298343 PCT