Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g1446 ATGTTTGGTGAAATGGACCAAAAGCAAGAACAAAACAAGGTGAAACATAACAATAGGTGTGAAAATAATGGCATTGATGTTACTCAAATTTCTCCCAAAGTTCCAAAATCAGTCTCACAAGTTTCTTCTGCAGCTGAGGGAGAAATCTTAAGGCGCCCTCGCGGAAGGCCAGCAGGGTCTAAGAACAAGCCAAAGGCACCAATAATAGTGACAAGGGATAGTGCTAATGCACTAAAAGCTCATGCAATGGAAGTAAGTTCTGGTTGTGATGTGAATGAGAGTTTATTGAACTTTGCAAGGAAGAAACAACGTGGCCTTTCCATACTTAGTGGTATTGGCTATGTGACAAATGTGACATTGCACCAACTAGCCTCAAATGGTACCATTATGACCCTTCATGGAAGATTTGAGATCCTTTCATTGTTGGGGTCAATACTTCCTCCACCAGCACCACCAGGGATCACTGGTCTCACTATTTACTTGGCTGGTGCTCAAGGCCAAGTTGTTGGAGGTGTTGTTGTTGGTGCTTTAATTGCTTCAGGACCTGTTGTTATCATGGCTGCATCATTCATGCACGCTACTTTCGATCGTTTGCCGTTGGAAGATGATCATGAACTTGCTTCTGCAATGCATAATCAACCTCAGCATTACCGTATCAACAACCATCATCTTCATATCTCAGATTTGCATGCAATGCCACACAACATGCTCACTAATGGTGCAATGGAACCAGAGATATACTCTTGGGCATCATCAAGGAACTTGTCAAAAACCTGA 777 0.426 MFGEMDQKQEQNKVKHNNRCENNGIDVTQISPKVPKSVSQVSSAAEGEILRRPRGRPAGSKNKPKAPIIVTRDSANALKAHAMEVSSGCDVNESLLNFARKKQRGLSILSGIGYVTNVTLHQLASNGTIMTLHGRFEILSLLGSILPPPAPPGITGLTIYLAGAQGQVVGGVVVGALIASGPVVIMAASFMHATFDRLPLEDDHELASAMHNQPQHYRINNHHLHISDLHAMPHNMLTNGAMEPEIYSWASSRNLSKT* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g1446 258 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 16 11 257 - -
Lan9g1446 258 MobiDBLite consensus disorder prediction 21 44 - -
Lan9g1446 258 MobiDBLite consensus disorder prediction 1 20 - -
Lan9g1446 258 Pfam Plants and Prokaryotes Conserved (PCC) domain 80 190 IPR005175 -
Lan9g1446 258 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 11 257 IPR014476 GO:0003680
Lan9g1446 258 MobiDBLite consensus disorder prediction 1 65 - -
Lan9g1446 258 PIRSF ESCAROLA 2 254 IPR014476 GO:0003680
Lan9g1446 258 ProSiteProfiles PPC domain profile profile. 75 212 IPR005175 -
Lan9g1446 258 Gene3D - 79 227 - -
Lan9g1446 258 SUPERFAMILY AF0104/ALDC/Ptd012-like 75 204 - -
Lan9g1446 258 CDD DUF296 81 161 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g1446 Lan-Chr9 21294470 21295390 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g1446 34 257 AT-hook Motif Nuclear Localized (AHL) Family AT2G42940 66.667 7.32e-91 267
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g1446 - - gmx:100804941 328.176