LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lan9g1446	ATGTTTGGTGAAATGGACCAAAAGCAAGAACAAAACAAGGTGAAACATAACAATAGGTGTGAAAATAATGGCATTGATGTTACTCAAATTTCTCCCAAAGTTCCAAAATCAGTCTCACAAGTTTCTTCTGCAGCTGAGGGAGAAATCTTAAGGCGCCCTCGCGGAAGGCCAGCAGGGTCTAAGAACAAGCCAAAGGCACCAATAATAGTGACAAGGGATAGTGCTAATGCACTAAAAGCTCATGCAATGGAAGTAAGTTCTGGTTGTGATGTGAATGAGAGTTTATTGAACTTTGCAAGGAAGAAACAACGTGGCCTTTCCATACTTAGTGGTATTGGCTATGTGACAAATGTGACATTGCACCAACTAGCCTCAAATGGTACCATTATGACCCTTCATGGAAGATTTGAGATCCTTTCATTGTTGGGGTCAATACTTCCTCCACCAGCACCACCAGGGATCACTGGTCTCACTATTTACTTGGCTGGTGCTCAAGGCCAAGTTGTTGGAGGTGTTGTTGTTGGTGCTTTAATTGCTTCAGGACCTGTTGTTATCATGGCTGCATCATTCATGCACGCTACTTTCGATCGTTTGCCGTTGGAAGATGATCATGAACTTGCTTCTGCAATGCATAATCAACCTCAGCATTACCGTATCAACAACCATCATCTTCATATCTCAGATTTGCATGCAATGCCACACAACATGCTCACTAATGGTGCAATGGAACCAGAGATATACTCTTGGGCATCATCAAGGAACTTGTCAAAAACCTGA	777	0.426	MFGEMDQKQEQNKVKHNNRCENNGIDVTQISPKVPKSVSQVSSAAEGEILRRPRGRPAGSKNKPKAPIIVTRDSANALKAHAMEVSSGCDVNESLLNFARKKQRGLSILSGIGYVTNVTLHQLASNGTIMTLHGRFEILSLLGSILPPPAPPGITGLTIYLAGAQGQVVGGVVVGALIASGPVVIMAASFMHATFDRLPLEDDHELASAMHNQPQHYRINNHHLHISDLHAMPHNMLTNGAMEPEIYSWASSRNLSKT*	259

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lan9g1446	258	PANTHER	AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 16	11	257	-	-
	Lan9g1446	258	MobiDBLite	consensus disorder prediction	21	44	-	-
	Lan9g1446	258	MobiDBLite	consensus disorder prediction	1	20	-	-
	Lan9g1446	258	Pfam	Plants and Prokaryotes Conserved (PCC) domain	80	190	IPR005175	-
	Lan9g1446	258	PANTHER	AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15	11	257	IPR014476	GO:0003680
	Lan9g1446	258	MobiDBLite	consensus disorder prediction	1	65	-	-
	Lan9g1446	258	PIRSF	ESCAROLA	2	254	IPR014476	GO:0003680
	Lan9g1446	258	ProSiteProfiles	PPC domain profile profile.	75	212	IPR005175	-
	Lan9g1446	258	Gene3D	-	79	227	-	-
	Lan9g1446	258	SUPERFAMILY	AF0104/ALDC/Ptd012-like	75	204	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Lan9g1446	Lan-Chr9	21294470	21295390	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lan9g1446	34	257	AT-hook Motif Nuclear Localized (AHL) Family	AT2G42940	66.667	7.32e-91	267

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lan9g1446	-		-	gmx:100804941	328.176

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