Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g1445 ATGGATAATGACAAGGGTCCTTTCTATTACAGCAACCACCATGAACTCAACCAGTCAAGCTTTCCATTTTTTATGGACAACCACCACTCAACACTAGAAAACTTTCAAGGGTTTTTTGATCCTTCATTACATGGTAATTCCATGGATTGTAACACTCTTTCTAGACCCTTTGACTTGTCTTGTAATTCAACATCTGAAGTGATTGATGAAAACTACAAGAAACATATTAGTGCTGGAGACTTAACAATGATCAGTGAGAACCATTCGATACTCAATTCTTCATTGTCTTCTTCATCTAATGAAGCAGATCAAGTAGTAACAGAAGAAGACTCAGCCAAAAGCAAGAAAGATAAGCAACCAAAAGAGTGTGAAGAAGATGGAGATCATGAAAAGTCTAAGAAAGAGAACAAAACCAAAAAGAAAGAGAAAAAGGCAAGAGAGGCACGCTTTGCCTTCTTGACTAAAAGTGAGGTGGATCACCTTGAAGATGGATACAGATGGAGAAAATATGGACAGAAAGCTGTGAAGAATAGTCCATACCCAAGGAGTTACTACAGATGCACCACTCAGAAGTGCAATGTGAAGAAAAGAGTGGAAAGGTCATTTGAAGACCCAAGCACAGTGATCACAACATATGAAGGGCAACATAACCATCACTGTCCAACAACACTGAGGGGTAATGCTATCACAATGTTCTCTTCACCTTCTCTTTTTGGTTCTACATCTATAGGACCAAGCTTCCCTCAAGATTTCCTTGCTCAGTTGCTTCCAAGTTATAATAACCAATACTTCAGAAATCATCATGAACAAAATCAAAATACCATGTTGTTCCATAACCAAAATCAGCAGCTTCAATTCCCTCGTGACAATGGATTGTTGCAAGATTTACTACCCTCATTCCAAGGCAGACAAAAGCCATGA 921 0.3865 MDNDKGPFYYSNHHELNQSSFPFFMDNHHSTLENFQGFFDPSLHGNSMDCNTLSRPFDLSCNSTSEVIDENYKKHISAGDLTMISENHSILNSSLSSSSNEADQVVTEEDSAKSKKDKQPKECEEDGDHEKSKKENKTKKKEKKAREARFAFLTKSEVDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCNVKKRVERSFEDPSTVITTYEGQHNHHCPTTLRGNAITMFSSPSLFGSTSIGPSFPQDFLAQLLPSYNNQYFRNHHEQNQNTMLFHNQNQQLQFPRDNGLLQDLLPSFQGRQKP* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g1445 306 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 13 300 IPR044810 GO:0003700
Lan9g1445 306 Gene3D WRKY domain 145 222 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan9g1445 306 Pfam WRKY DNA -binding domain 162 218 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan9g1445 306 SMART WRKY_cls 161 220 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan9g1445 306 SUPERFAMILY WRKY DNA-binding domain 154 221 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan9g1445 306 ProSiteProfiles WRKY domain profile. 156 221 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan9g1445 306 MobiDBLite consensus disorder prediction 93 146 - -
Lan9g1445 306 MobiDBLite consensus disorder prediction 106 146 - -
Lan9g1445 306 PANTHER WRKY TRANSCRIPTION FACTOR 71-RELATED 13 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g1445 Lan-Chr9 21287700 21289582 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g1445 109 226 WRKY Transcription Factor Family AT4G18170 75.630 5.64e-54 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lan9g1445 WRKY 1.7e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g1445 - - aprc:113847247 357.451
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan2g1268 2 23688708 23690739 Lan9g1445 9 21287700 21289582 LSH