Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g1444 ATGTCATCTGAAAATTCTTTGAATGACGTGTTGTCAAAGAAGACGTCAATTTTTGGTTTGAAACGATGGGCTTTGCTTGGCATAGGTGTTGGTGCATTTATAGTTCTGGTTCTTTGCATATTATATATATGGGTGATATTCCGGAGAAAGTCTAGGACTCGGAGATCTCGGGAGAAGTACTCTCTATCCCAAATACCAAATGTCTCAAAAGAAATCAACATTGACAAAGTTGGGGTGCAGGATTCTCATGTTCAACAAGAAAATGCATTTGTTCCTCCTCAGTACAAGGCAAATGATAAGAATTCAGATAATGTATCGGTTCATATGGGCATGATCAGATCCACTGATCCTGATATTATAAGTCAAAGCAGTTCAATTTATCATCATGAGAGAGGATTTAGTTCAATGTCGGGGGAAGAAAGAAGCTCAGGGAGTGTTACCAAGCAGTATGCATTGTCGTATGGAGGGTTACTGACTGCTTCTCCTTTAAACGGCTTGCCTGAATTTTCGCATCTCGGATGGGGCCACTGGTTTACGCTTAGAGATCTGCAACAAGCAACCAATCGTTTCTCAGCAGATAACATTGTCGGTGAGGGTGGATATGGGGTTGTTTACAAGGGAAGACTGATTAATGGAACCGAGGTGGCAGTGAAGAAAATTCTTAACAACTTGGGACAAGCCGAGAAAGAATTCAGGGTTGAAGTGGAGGCTATTGGTCATGTTAGACATAAAAATCTTGTGCGTCTGCTTGGATATTGCGTAGAAGGAGTTAATAGGCTGCTGGTTTATGAATATGTGAACAACGGCAACTTAGAACAATGGTTACATGGAGCCATGCACCAACAGGGGATACTTACCTGGGAAGCCCGCATGAAAGTTATACTCGGCACAGCCAATGCGCTTGCTTACTTACATGAAGCAATAGAACCAAAAGTGGTTCACCGGGATATAAAGTCTAGCAACATATTGATTGATGATGAGTTCAATGCAAAGGTTTCTGATTTTGGTTTGGCCAAACTTCTGGATTCAGGAGAAAGTCACATAACCACTAGAGTAATGGGAACATTTGGTTATGTGGCACCAGAATATGCTAACAGTGGTTTGTTAAATGAGAAGAGTGATATTTACAGCTTCGGCGTCCTCCTGCTGGAAGTAATTACTGGAAGGGACCCTGTAGACTATGCACGTCCTACTAATGAGGTTAATCTTGTTGAGTGGCTCAAGATGATGGTTGGGTCAAGGAGGGCTGAGGAAGTTGTGGACTCGAGCCTTGAAGTTAAACCTTCAATACGCGTGTTAAAGCGTGTCCTTCTGGTTGCACTTAAGTGTGTTGATCCTGATGCAGTTAAGAGGCCCAAAATGAGTCAGGTTGCAAGGATGCTTGAAGCTGACGAATATATAGTCCGAGAGGATCGAAGGAATAGAAGAAGCCGCTCTGCCAGCATGGAAATCGAATCTGTGAAGGAACCTGGTCCACCTGATGCTGAATATGCGGGACATTACGAAAGCCACCCGCTGGATACAACTCAAAGATAG 1536 0.4303 MSSENSLNDVLSKKTSIFGLKRWALLGIGVGAFIVLVLCILYIWVIFRRKSRTRRSREKYSLSQIPNVSKEINIDKVGVQDSHVQQENAFVPPQYKANDKNSDNVSVHMGMIRSTDPDIISQSSSIYHHERGFSSMSGEERSSGSVTKQYALSYGGLLTASPLNGLPEFSHLGWGHWFTLRDLQQATNRFSADNIVGEGGYGVVYKGRLINGTEVAVKKILNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCVEGVNRLLVYEYVNNGNLEQWLHGAMHQQGILTWEARMKVILGTANALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANSGLLNEKSDIYSFGVLLLEVITGRDPVDYARPTNEVNLVEWLKMMVGSRRAEEVVDSSLEVKPSIRVLKRVLLVALKCVDPDAVKRPKMSQVARMLEADEYIVREDRRNRRSRSASMEIESVKEPGPPDAEYAGHYESHPLDTTQR* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g1444 511 Coils Coil 210 230 - -
Lan9g1444 511 SUPERFAMILY Protein kinase-like (PK-like) 174 462 IPR011009 -
Lan9g1444 511 Pfam Protein kinase domain 192 458 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan9g1444 511 PANTHER RECEPTOR-LIKE KINASE PLANT 2 505 - -
Lan9g1444 511 ProSiteProfiles Protein kinase domain profile. 190 467 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan9g1444 511 CDD STKc_IRAK 196 462 - -
Lan9g1444 511 Gene3D Transferase(Phosphotransferase) domain 1 266 480 - -
Lan9g1444 511 Gene3D Phosphorylase Kinase; domain 1 172 265 - -
Lan9g1444 511 ProSitePatterns Serine/Threonine protein kinases active-site signature. 312 324 IPR008271 GO:0004672|GO:0006468
Lan9g1444 511 MobiDBLite consensus disorder prediction 472 511 - -
Lan9g1444 511 ProSitePatterns Protein kinases ATP-binding region signature. 196 219 IPR017441 GO:0005524
Lan9g1444 511 PANTHER OS01G0323000 PROTEIN 2 505 - -
Lan9g1444 511 SMART serkin_6 190 467 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g1444 Lan-Chr9 21281302 21285867 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g1444 5 464 Trihelix Transcription Factor Family AT1G70460 39.056 8.32e-94 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Lan9g1444 Pkinase 2.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g1444 - - gmx:100778444 790.801
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0918 4 11198801 11203895 Lan9g1444 9 21281302 21285867 LSH
Lan11g0119 11 686026 690492 Lan9g1444 9 21281302 21285867 LSH
Lan2g0987 2 20946012 20951048 Lan9g1444 9 21281302 21285867 LSH
Lan4g0918 4 11198801 11203895 Lan9g1444 9 21281302 21285867 PCT
Lan9g1444 9 21281302 21285867 Lan11g0119 11 686026 690492 PCT
Lan9g1444 9 21281302 21285867 Lan9g1444 9 21281302 21285867 PCT
Lan11g0119 11 686026 690492 Lan9g1444 9 21281302 21285867 PCT
Lan9g1444 9 21281302 21285867 Lan4g0918 4 11198801 11203895 PCT
Lan2g0987 2 20946012 20951048 Lan9g1444 9 21281302 21285867 PCT