Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g1433 ATGGTTACTTCTGTTTTCAGCTTTGCACTCTTTGGCTTCATCTTTTTGTGTCTAACTTGCCATGCTGCTTCTGTTTTTTCAACCCCTATGTCTTTGAGAATCCAAGCTTCTATCTTGGTTTCTGTTAAACAAGAGTTTGGAGTCAAACCTTCTTGTTTGAATAGTTGGAACATGTCAAATTACATGTCACTTTGCACTTGGCATGGCATAAAGTGTGACCATAATAACATGTCTGTTGTGTCACTAGACATATCCAACTTAAATGTTTCTGGCTCATTTTCAGCTGTTATTCATAAGCTACAAGGCTTAAGATTCCTCAACATCTCAAACAACATGTTCAGTGGAAGTTTGGGTTTGGAATTCTCAAAACTGAAAGAGCTTCAAGTGATAGATGCTTATGACAACATGTTCAATAGTTCCCTACCTCTTTTTGTCCTTGAACTCCCTAAGCTCAAGCACTTGAATTTTGGAGGGAACTACTTCTATGGACTAATACCTCCAAGCTATGGCAACATGGTGCAACTCAATTATCTTTCTCTTGCAGGAAATGATTTGAGAGGTTTCATACCAACTGAACTTGGAAACCTCACTAATCTGACACATCTTTTTTTGGGGTATTACAATAAATTTGATGGTGGAATACCACCTCATTTTGGTAAGTTGATCAATCTAGTTCATCTTGATATTGCTAACTGTGGCATGATAGGTCCAATTCCTGCTGAGTTAGGCAACCTATACAAGTTGGACACACTATTCTTGCAAACTAATCAGCTTAATGGTTCAATCCCTCCTCAACTAGGGAACCTTAGTAGCTTGAAATCTCTTGATCTATCAAACAATGAGTTAACAGGAGATATTCCAAATGAGTTCTCAGGTCTTCATGAACTTACCCTCTTCAACTTATTCATCAACATGTTCAATGGTGAAATTCCACACTTCATTGCTCAGCTACCTAACTTGGAAGTGTTAAAGTTATGGCAGAATAACTTCACTGGTGCCATTCCTTCAGAGCTAGGCCAGAATGGTAAATTGACTGAGCTTGATCTTTCAACAAATAAGCTCACTGGATTAGTGCCAAAATCTCTATGCCTTGGAAAGAGGCTCAAGATTTTGATCTTGCTTAATAATTTTCTGTTTGGATCTTTACCTTCTGATCTTGGCCAATGCTATACACTCCAAAGAGTTCGTTTGGGACAGAACTATTTAACTGGATCAGTACCAAAAGGTTTTCTTTATTTGCCTGAGTTATCCCTTTTGGAACTACAGAACAATTATCTTAGTGGATGGCTTCCACAACAAGCAACAAGCACTACCTCTTCACCCTCCAAACTAGCGCAGCTGAATCTATCGAACAACCGTTTATCTGGGCCTCTCCCAACCTCAATTGGAAACTTTCCAAGCTTGCAAACTCTTATGCTCCATGGAAATAGATTCTCAGGAGAAATCCCTCAAGATATAGGGAGGTTGAAAAATATTCTCAAGTTGGATTTAAGTATTAACAACTTTTCAGGAAGTATTCCTCCTGAGATAGGTAACTCTATCTTACTCACATATTTAGATTTGAGCCAAAACCAACTTTCAGGCCCTATTCCAATTCAAGTCTCTCAAATTCACATACTAAACTATCTCAATGTTTCATGGAACCACCTAAACCAAAGTCTTCCCAAGGAGCTTGGGGCAATGAAAGGGTTAACTTCAGCCGATTTCTCTCACAACAACTTCTCTGGTTCAATACCTGAAGTAGGACAATTCTTAGTCTTTAACTCAACATCCTTTGAGGGTAACCCTCAGCTATGTGGATATGACTTGAATCCATGCAACCATTCTACTCCAGTGTTGAACTCTCATGATAAAACCAGTGCAAAACCTGGAGTTCCAGGGAAATATAAGCTTCTTTTTGCATTAGCACTTTTAGGCTGTTCATTAGTTTTTGCAACATTGGCCATAATCAAGAGCAGGAAGGGAAAAAAGCACTCTAATTCATGGAAACTCACAACATTTCAGAAGCTGGAATATGGAAGTGAAGATATCTTAGGATGCATAAAGGAAAGCAATGTTATAGGAAGAGGAGGAGCTGGTGTTGTATATGGAGGAATCATGCCAAATAGAGAACAAGTAGCAGTGAAGAAATTGTTAGGAATCAACAAAGGTTGTTCTCATGATAATGGCCTCTCAGCAGAAATAAAAACACTTGGTAGAATCAGGCACAGGTACATTGTAAAGTTGCTTGCATTTTGTTCAAATAGAGAGACCAATTTACTTGTTTATGAGTACATGCCAAATGGAAGCTTAGGTGAAGCATTGCATGGAAAAAAAGGTGAGTTTCTTAAGTGGGATACTAGGCTGAAAATAGCAACAGAAGCTGCAAAAGGACTTTGTTATTTGCACCATGATTGTTCCCCTCTCATAATCCATAGAGATGTCAAATCCAATAACATATTATTGAACTCTGATTTTGAGGCTCATGTTGCTGATTTTGGACTTGCCAAGTTCTTGCAAGATACTGGAACATCAGAGTGCATGTCTTCTATTGCTGGTTCTTATGGCTATATAGCTCCAGAATATGCATACACATTGAAAGTTGATGAGAAAAGTGATGTTTATAGCTTTGGAGTGGTGGTGCTAGAACTGTTAACAGGTAGAAGACCTGTTGGAGATTTTGGTGAAGAAGGACTTGACATTGTTCAATGGACCAAGATGCAAACAAATTGGTGCAAAGAGAGAGTTGTTAAGATTCTTGATGGGAGAATACATCATCATACACCCTTAGATGAAGCAATGCAAGTGTTCTTTGTAGCTATGTTATGTGTTCAAGAACAAAGTGTGGAGCGACCAACCATGAGGGAAGTTGTTGAAATGCTTGTACAAGCAAAGCAGCCAAATACATTTCAATTGCAGTGA 2901 0.3857 MVTSVFSFALFGFIFLCLTCHAASVFSTPMSLRIQASILVSVKQEFGVKPSCLNSWNMSNYMSLCTWHGIKCDHNNMSVVSLDISNLNVSGSFSAVIHKLQGLRFLNISNNMFSGSLGLEFSKLKELQVIDAYDNMFNSSLPLFVLELPKLKHLNFGGNYFYGLIPPSYGNMVQLNYLSLAGNDLRGFIPTELGNLTNLTHLFLGYYNKFDGGIPPHFGKLINLVHLDIANCGMIGPIPAELGNLYKLDTLFLQTNQLNGSIPPQLGNLSSLKSLDLSNNELTGDIPNEFSGLHELTLFNLFINMFNGEIPHFIAQLPNLEVLKLWQNNFTGAIPSELGQNGKLTELDLSTNKLTGLVPKSLCLGKRLKILILLNNFLFGSLPSDLGQCYTLQRVRLGQNYLTGSVPKGFLYLPELSLLELQNNYLSGWLPQQATSTTSSPSKLAQLNLSNNRLSGPLPTSIGNFPSLQTLMLHGNRFSGEIPQDIGRLKNILKLDLSINNFSGSIPPEIGNSILLTYLDLSQNQLSGPIPIQVSQIHILNYLNVSWNHLNQSLPKELGAMKGLTSADFSHNNFSGSIPEVGQFLVFNSTSFEGNPQLCGYDLNPCNHSTPVLNSHDKTSAKPGVPGKYKLLFALALLGCSLVFATLAIIKSRKGKKHSNSWKLTTFQKLEYGSEDILGCIKESNVIGRGGAGVVYGGIMPNREQVAVKKLLGINKGCSHDNGLSAEIKTLGRIRHRYIVKLLAFCSNRETNLLVYEYMPNGSLGEALHGKKGEFLKWDTRLKIATEAAKGLCYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKFLQDTGTSECMSSIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVVLELLTGRRPVGDFGEEGLDIVQWTKMQTNWCKERVVKILDGRIHHHTPLDEAMQVFFVAMLCVQEQSVERPTMREVVEMLVQAKQPNTFQLQ* 967
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g1433 966 SUPERFAMILY L domain-like 359 606 - -
Lan9g1433 966 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE BAM3 96 963 - -
Lan9g1433 966 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE BAM3 8 103 - -
Lan9g1433 966 SMART LRR_typ_2 172 196 IPR003591 -
Lan9g1433 966 SMART LRR_typ_2 537 561 IPR003591 -
Lan9g1433 966 SMART LRR_typ_2 465 489 IPR003591 -
Lan9g1433 966 SMART LRR_typ_2 413 437 IPR003591 -
Lan9g1433 966 SMART LRR_typ_2 269 292 IPR003591 -
Lan9g1433 966 SMART LRR_typ_2 342 364 IPR003591 -
Lan9g1433 966 SMART LRR_typ_2 245 268 IPR003591 -
Lan9g1433 966 SMART LRR_typ_2 317 341 IPR003591 -
Lan9g1433 966 Gene3D Ribonuclease Inhibitor 287 379 IPR032675 -
Lan9g1433 966 Gene3D Transferase(Phosphotransferase) domain 1 759 965 - -
Lan9g1433 966 Pfam Protein kinase domain 683 952 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan9g1433 966 SUPERFAMILY RNI-like 75 403 - -
Lan9g1433 966 ProSiteProfiles Protein kinase domain profile. 681 962 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan9g1433 966 SUPERFAMILY Protein kinase-like (PK-like) 675 955 IPR011009 -
Lan9g1433 966 PANTHER UNNAMED PRODUCT 8 103 - -
Lan9g1433 966 PANTHER UNNAMED PRODUCT 96 963 - -
Lan9g1433 966 ProSitePatterns Serine/Threonine protein kinases active-site signature. 803 815 IPR008271 GO:0004672|GO:0006468
Lan9g1433 966 ProSiteProfiles Leucine-rich repeat profile. 343 364 IPR001611 GO:0005515
Lan9g1433 966 Pfam Leucine rich repeat N-terminal domain 35 73 IPR013210 -
Lan9g1433 966 Gene3D Phosphorylase Kinase; domain 1 650 758 - -
Lan9g1433 966 SMART serkin_6 681 954 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan9g1433 966 Pfam Leucine rich repeat 247 304 IPR001611 GO:0005515
Lan9g1433 966 Gene3D Ribonuclease Inhibitor 483 607 IPR032675 -
Lan9g1433 966 Gene3D Ribonuclease Inhibitor 33 187 IPR032675 -
Lan9g1433 966 Gene3D Ribonuclease Inhibitor 188 286 IPR032675 -
Lan9g1433 966 Gene3D Ribonuclease Inhibitor 380 482 IPR032675 -
Lan9g1433 966 ProSiteProfiles Leucine-rich repeat profile. 271 293 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g1433 Lan-Chr9 21196043 21200589 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g1433 21 956 Receptor kinase-like Gene Family AT5G65700 56.418 0.0 1051
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lan9g1433 Pkinase 3.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g1433 - - gmx:100816158 1539.63