Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g1425 ATGGGCATGGTTGGCCTCCGTGACCTTTTTGTCGTGACACCCGCTTCCACCTTCCACCATCAACATGAACAACCGCACTTCTCCGACCACCCTCATCATCTTTCCATCAATAATAGTTCCAACCCCGCCACCGCACTCGGCGTCGGCATCATCCCTCTCCTCGCTGCTACACCTTGTCTCGACAACGAAACAATGATGAGTAACCGTAACCGTAGCAACAGTGCAACTCAAGGAATTCAGTTTTGGCAAGATCAGCAACATCACCATTACTTTAAAAACCACAATGTGAATGCTGGTCAAGAAAATTATCTTCAGAGTGGTGGCACCGGCGACGGTGGTGGAGTTGAAGTAACTATAACTGGTTCGGGTAATAATAGTGGAGGAACGATGACATGCCAAGATTGTGGGAACCAAGCTAAGAAAGATTGCTCTAACAGAAGGTGCAGGACTTGTTGTAAGAGTAGAGGTTTTGATTGCCCTACTCACGTGAAGAGCACGTGGGTTCCTGCTGCACGCCGGAGAGAACGACAACTTATGCAAGCAGTTACTGGTGCTGGTGGTTCTACTGCTTCTACTTCTGGTGCTAAGAAACCTAAGCTCATTTCTTCACACACTACTACTTCTCATACTTCAACTTCTAACACTACTCCTCCTAGAAGTTTTGACACTAGTTCTAGTCACCAAGATGCGGGTATCAAAGAGCCGCTGCCAGGTCAAATACGCGCACCGGCGGTGTTTAAGTGTGTCAAAGTAACCGCAGTAGAGGATGGAGATGATGAATATGCTTATCAAGCTGTTGTCAAGATTGGTGGCCATGTGTTTAAAGGGTTTCTCTATGATCAAGGGGTTGAAAATAGAGATATTTACCCGAATCTCTCTGAGTTGCATTTAGGTGGTGGCAATGGCGGAAATGGAAGTGGTGCCATCGGATCGGGGAGAAATGTGGTTTCATCTTCATCGCCGATGATGGATCCATCGGATGTTTATGGTGGGGGGTTGCTCGGAAGTTCAACATATGGTAATCCAATAAATTGA 1035 0.4676 MGMVGLRDLFVVTPASTFHHQHEQPHFSDHPHHLSINNSSNPATALGVGIIPLLAATPCLDNETMMSNRNRSNSATQGIQFWQDQQHHHYFKNHNVNAGQENYLQSGGTGDGGGVEVTITGSGNNSGGTMTCQDCGNQAKKDCSNRRCRTCCKSRGFDCPTHVKSTWVPAARRRERQLMQAVTGAGGSTASTSGAKKPKLISSHTTTSHTSTSNTTPPRSFDTSSSHQDAGIKEPLPGQIRAPAVFKCVKVTAVEDGDDEYAYQAVVKIGGHVFKGFLYDQGVENRDIYPNLSELHLGGGNGGNGSGAIGSGRNVVSSSSPMMDPSDVYGGGLLGSSTYGNPIN* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g1425 344 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 2 344 - -
Lan9g1425 344 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 2 344 IPR007818 GO:0003700|GO:0006355
Lan9g1425 344 TIGRFAM LRP1_Cterm: LRP1 C-terminal domain 236 283 IPR006511 -
Lan9g1425 344 MobiDBLite consensus disorder prediction 181 236 - -
Lan9g1425 344 MobiDBLite consensus disorder prediction 182 230 - -
Lan9g1425 344 TIGRFAM put_zinc_LRP1: putative zinc finger domain, LRP1 type 131 173 IPR006510 -
Lan9g1425 344 Pfam Domain of unknown function (DUF702) 129 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g1425 Lan-Chr9 21132097 21133868 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g1425 1 328 C2H2 Transcription Factor Family AT5G12330 52.507 5.79e-90 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Lan9g1425 DUF702 1.4e-60 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g1425 - - lang:109357487 641.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan2g1244 2 23474648 23477262 Lan9g1425 9 21132097 21133868 LSH