Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g1412 ATGAGGAAGAAACTAGATACTCGTTTCCCTGCTTCTAGGATTAAGAAAATTATGCAAGCGGACGAGGATGTAGGGAAGATTGCAATGGCTGTGCCTCTTCTAGTTTCTAAAGCATTAGAGCTATTTCTGCAAGATTTATGTGATCGAACATACGATATAACTGTGAGGAAAGGTGCAAAGACCATGAATGCTTTCCATTTGAAGCAGTGTGTACAAACCTTTAATGTCTTTGATTTTCTGAAAGACATTGTCAGCAAGGTTCCTGATTTAGGCGGCTCTGCTGCACCTGGTGACGATCGTGCTGTTACCAAGAGGAGTAGGAAAGTTGCTGAAGACGGTGACAATGACAGTGACGAAGAGCAAAAGAAAAGTAAAATGCCAGAGCCTGGTCATACTAGTGGCAGAGGAAGGGGTAGGGGCAGAGGTAGGGGTCGTGGCCGAGGAAGTAGAACAGCAGATCAAGAGATGGCTTCACACGTCAAGGTTGAAGATGATTCTGATATGTTGCACCAAAATGACAAGCACACTCGAAGCAATGAAAGCCTGGAAAACGTGCCAGACCCTGAAGAAGTTAAGCAAAGTTTTGCAGTTAGCAAACCGGCTGAAACTTGCATTCGGAATTTTGATTTAAATATGGAACCAGACGAGAACATGGATTCATTAGATGTACCTACTCCAGTCCCATCTAGTTCGCCTGTGAAATCAATGTCAGAAGAGAAGCATGAGGAATACCCTGGATGGTCATTGTCTGATATGGAAAAAATTGCCATTGATCCCATACAACTAGCAAACTTAAATAGAAATGTTGATGAAGATATGGAGGATTATGATGAAGAAATGTAG 843 0.4247 MRKKLDTRFPASRIKKIMQADEDVGKIAMAVPLLVSKALELFLQDLCDRTYDITVRKGAKTMNAFHLKQCVQTFNVFDFLKDIVSKVPDLGGSAAPGDDRAVTKRSRKVAEDGDNDSDEEQKKSKMPEPGHTSGRGRGRGRGRGRGRGSRTADQEMASHVKVEDDSDMLHQNDKHTRSNESLENVPDPEEVKQSFAVSKPAETCIRNFDLNMEPDENMDSLDVPTPVPSSSPVKSMSEEKHEEYPGWSLSDMEKIAIDPIQLANLNRNVDEDMEDYDEEM* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g1412 280 Gene3D Histone, subunit A 1 86 IPR009072 GO:0046982
Lan9g1412 280 MobiDBLite consensus disorder prediction 88 247 - -
Lan9g1412 280 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 1 279 - -
Lan9g1412 280 MobiDBLite consensus disorder prediction 100 135 - -
Lan9g1412 280 MobiDBLite consensus disorder prediction 146 187 - -
Lan9g1412 280 PANTHER HISTONE SUPERFAMILY PROTEIN 1 279 - -
Lan9g1412 280 SUPERFAMILY Histone-fold 4 88 IPR009072 GO:0046982
Lan9g1412 280 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 8 71 IPR003958 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g1412 Lan-Chr9 21034969 21037917 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g1412 1 269 CCAAT-HAP5 Transcription Factor Family AT3G12480 43.493 2.32e-60 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Lan9g1412 CBFD_NFYB_HMF 1.9e-17 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g1412 K21752 - gmx:100814800 412.149
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g0162 11 1038908 1041612 Lan9g1412 9 21034969 21037917 LSH