Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g1394 ATGTTTTCTACTTGGTTGATATTGTTGTTGTCAGTGGCTATTGCATTTGGGAGTTCAGATATTGAGTCACTCCTTGAACTCAGGAATAGCATTCAGAATGACCCTTCTGAACTTATTCTTAATTCTTGGGATTCTAAGTCTTTAGATTCATATGGATGTCCTCAGAACTGGTATGGCATATTGTGTAGTGAAGGCAATGTTATATCAATTACTTTGGATAATGCTGGTTTGGTTGGAGAGTTCAATTTCCTTGCAATTAGTGGCCTTAAAATGCTTTACAATTTGTCAATTATGAACAATCAATTCACTGGAAGTATCTTATATATTGGTTCAATGGTGTCACTTGAATTTCTTGATTTGTCCCTCAACAAGTTTCATGGCTTGGTACCACCTAATATTGCTGAATTAAGTAGTTTACTATATCTGAATCTTTCTTCAAATGAATTTGAAGGTGCTGTTCTTATTGACTTTTACAAACTTGAGAGGTTGAAGTACATAGATTTGCATAGTAATAACTTTTCTGGTGATATCATGCACATATTCTGTCTGATGGGTAGTGTTCTACATGTTGACTTAAGCAGCAATAATTTTTCTGGTACATTGGATTTGAGACTTGGAAATGACTCATTTCTCTCCTCTATTCGACATTTAAATATTAGTCACAATTCCGTGTCTGGAGAGCTATTTGCCCATGATGGCATGCCATACCTTGACAATTTAATGGTCTTTGATGCTAGTAGTAATCAGTTGGTGGGTAATATACCTTCCTTCGCGTTTGCGGTATCATTAAGGATTCTTCGACTCGGATGCAACCAGTTGTCAGGTTCACTACCAGAAGATTTATTGAAGGAAAGTTCAATGCTGTTGTCTGAACTTGATCTTAGTCAAAACAAGCTTGAAGGTCCGGTTCGAAGTATTACCTCAGTAACTCTTAAGAAGCTTAATTTATCTTCAAACAACTTGTCAGGCCCCTTACCTCTCACAGTAGGCCACTGTGCCATTGTGGACTTGAGTTATAACGAACTTTCGGGCGATATTACAAGGATCCAGTATTGGGGTGACTATGTGGAAGTTATTCAGCTTAGCTCAAACTCATTGACGGGAATGCTGCCAAATGAAACTTCTCAGTTTTTAAGGCTAACAACACTTAAGGTATCCAATAACTCATTGGAGGGTTTTCTCCCACCAATCTTGGGGACATACCTTGAACTAGAAGAGATTGATCTTAGTCTTAACCAACTTTCTGGTTTCCTTCTACCTAGCCTTTTCACCTCAACCAAGTTGACGGATCTTAACCTTTCGAACAATAACTTTTCTGGACCAATTCCTATTCAACTTCAGCAAATTCCGAATAATCCATTTGTTTCTGCTGAGAATTATAGTCTTGTGTCTCTTGATCTTTCATACAGCAACTTGAGTGGGCTATTTCCTTCAAATATAAGTAGTTTTTACAATTTAGAATATCTCAATCTATGTGTCAACAAATTGGAAGGTACTATTCCGAATGACCTTCCAGTTAATTTGAGAGGATTCAATGTGTCCTTCAACAATCTTTCTGGTGTTGTACCAGACAACTTAATGCATTTTCCGGAATCAGCGTTTCATCCCGGAAATACCCTGTTGATATTTCCACCTTCAACATTATCACCAGATGATTGGTCACTTAAAAAATCCACAACTATGAGAGCCTTGATCGGAAGTTCGGTTACTGGTGCTTTCGTGATCGCTTTTATGGGTATTATAATCATTTACTATAGGCTTCTTTGGCAAAATGAAAAGACTTCTAAACAAAATGCAGAAAGAGTCATCATTCAACAGAGTTCTTCCACATTAAATAGCGAGGCACCTAATAAAAATTTAGAAGGATTACCTTCTACTCAAAGGGGGTATGATGATGATGCTGGAATCATTCATGCAGTGTTAACGAATCCGGAAGATCTTGGCCATCCTGAATTAGTTTACAATGGTGAAGGATCACATTTGCCAATTTATCCTTCGTCTACGTCAAATCCTTCGTCCTCTAAAAGCCATCAGATCGAGAATCCTGGTTCACTCAGAATATCCTCTCTGGACAATCTGGTTGGGGACTTGCATATGCTCGACGGGTCGTTGATGGTTACCACAGAAGAACTTTCAAGTGCTCCAGCAGAAGTTATTGGAAGGAGTTGTCACGGAACACTGTATAAGACTACACTTGAATCTGGTCATGCATTGGCTATCAAATGGTTAAGGGAAGGAATAACCAAAGGAAAACAGGAGTTTGCAAGGGAAGTAAAGAAACTTGGGACTATAAAGCATCCAAGTCTGGTTTCTATTCAGGGTTACTTCCTCGGGACGAAGGAGCATGAGAGGTTGATCATATCAAATTACATGAATGCACAATCTATGGACAGTTATCTCCATGAGGCAGATAAAAGAAATCTTCAACCTTTATCACTCGAGGAAAGGCTCAGGGTCGCTGTAGACGTGGCGCGATGTCTGAATTACCTACACAATGAGAAAGCCATACCTCATGGCAACCTCCAATCCACAAACATCCTACTAGAAACTCCTAGCCGAAATGTCCTTCTCACGGATTACAGCTTGCATCGGATACTTACGCCTGCTGGTACTGCAGAGCAAGTGTTGAAAGCTGGTGCACTTGGTTATCGACCTCCCGAATTCGCTAGATCAAACAAACCAAGTCCATCCTTAAAGAGTGATGTGTATGCATTTGGAGTAGTCTTGTTAGAACTCCTAACAGGAAGAAACTCAGTAGAAATAGTTTCCGGGGTTGCAGGAGTTATTGAACTCACAGATTGGGTTAGATTCTTAGCTGAAAAAAACAACTATAGCCAATGCTTTGATAGGTTTCTTATGGACAAACAACACTGTGATGAAAGATCATGTAGAATTCTTGATGATATGCTAAAAGTGGCCCTGAGATGCATACTTCCTCCATCAGATAGACCAGATATGAGTACAATTTTTGAAGATCTTTCAACAATAAACTAG 2994 0.3904 MFSTWLILLLSVAIAFGSSDIESLLELRNSIQNDPSELILNSWDSKSLDSYGCPQNWYGILCSEGNVISITLDNAGLVGEFNFLAISGLKMLYNLSIMNNQFTGSILYIGSMVSLEFLDLSLNKFHGLVPPNIAELSSLLYLNLSSNEFEGAVLIDFYKLERLKYIDLHSNNFSGDIMHIFCLMGSVLHVDLSSNNFSGTLDLRLGNDSFLSSIRHLNISHNSVSGELFAHDGMPYLDNLMVFDASSNQLVGNIPSFAFAVSLRILRLGCNQLSGSLPEDLLKESSMLLSELDLSQNKLEGPVRSITSVTLKKLNLSSNNLSGPLPLTVGHCAIVDLSYNELSGDITRIQYWGDYVEVIQLSSNSLTGMLPNETSQFLRLTTLKVSNNSLEGFLPPILGTYLELEEIDLSLNQLSGFLLPSLFTSTKLTDLNLSNNNFSGPIPIQLQQIPNNPFVSAENYSLVSLDLSYSNLSGLFPSNISSFYNLEYLNLCVNKLEGTIPNDLPVNLRGFNVSFNNLSGVVPDNLMHFPESAFHPGNTLLIFPPSTLSPDDWSLKKSTTMRALIGSSVTGAFVIAFMGIIIIYYRLLWQNEKTSKQNAERVIIQQSSSTLNSEAPNKNLEGLPSTQRGYDDDAGIIHAVLTNPEDLGHPELVYNGEGSHLPIYPSSTSNPSSSKSHQIENPGSLRISSLDNLVGDLHMLDGSLMVTTEELSSAPAEVIGRSCHGTLYKTTLESGHALAIKWLREGITKGKQEFAREVKKLGTIKHPSLVSIQGYFLGTKEHERLIISNYMNAQSMDSYLHEADKRNLQPLSLEERLRVAVDVARCLNYLHNEKAIPHGNLQSTNILLETPSRNVLLTDYSLHRILTPAGTAEQVLKAGALGYRPPEFARSNKPSPSLKSDVYAFGVVLLELLTGRNSVEIVSGVAGVIELTDWVRFLAEKNNYSQCFDRFLMDKQHCDERSCRILDDMLKVALRCILPPSDRPDMSTIFEDLSTIN* 998
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g1394 997 SUPERFAMILY Protein kinase-like (PK-like) 716 993 IPR011009 -
Lan9g1394 997 Gene3D Ribonuclease Inhibitor 260 350 IPR032675 -
Lan9g1394 997 Gene3D Ribonuclease Inhibitor 351 458 IPR032675 -
Lan9g1394 997 Gene3D Ribonuclease Inhibitor 459 546 IPR032675 -
Lan9g1394 997 PANTHER OS07G0626500 PROTEIN 5 996 - -
Lan9g1394 997 Gene3D Ribonuclease Inhibitor 19 179 IPR032675 -
Lan9g1394 997 SUPERFAMILY L domain-like 459 530 - -
Lan9g1394 997 Gene3D Transferase(Phosphotransferase) domain 1 792 997 - -
Lan9g1394 997 MobiDBLite consensus disorder prediction 607 624 - -
Lan9g1394 997 MobiDBLite consensus disorder prediction 661 682 - -
Lan9g1394 997 SUPERFAMILY L domain-like 50 282 - -
Lan9g1394 997 Pfam Protein tyrosine and serine/threonine kinase 718 934 IPR001245 GO:0004672|GO:0006468
Lan9g1394 997 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 5 996 - -
Lan9g1394 997 SUPERFAMILY L domain-like 209 455 - -
Lan9g1394 997 Gene3D Phosphorylase Kinase; domain 1 719 791 - -
Lan9g1394 997 ProSiteProfiles Protein kinase domain profile. 713 996 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan9g1394 997 MobiDBLite consensus disorder prediction 659 682 - -
Lan9g1394 997 MobiDBLite consensus disorder prediction 607 627 - -
Lan9g1394 997 Pfam Leucine rich repeat N-terminal domain 19 63 IPR013210 -
Lan9g1394 997 Gene3D Ribonuclease Inhibitor 180 259 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g1394 Lan-Chr9 20943412 20947653 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g1394 28 986 Receptor kinase-like Gene Family AT1G55610 25.448 2.94e-65 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lan9g1394 PK_Tyr_Ser-Thr 2.9e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g1394 - - ccaj:109792420 1413.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan2g1209 2 23234025 23240219 Lan9g1394 9 20943412 20947653 LSH