Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g1391 ATGGAAGACAAAAAAGTAGCAAAAACAAGTGAAGGAAGTTCCATAAGATGTAAAGCTGCAGTTTCTCGAAAACCAGGTGAGGATTTGACTATTGAGGAGATAATAGTGGCACCACCAATGTTTGGTGAAGCTAGGATTCGTATTATATGCACTTCTCTTTGCCACAGTGATGTTACTTTCTGGAATTTGCAGGGTCCTCCTGCAATTTTCCCTAGAATTCTGGGCCATGAAGCAATTGGAGTTGTGGAAAGTGTAGGGGAAGATGTAACTGAAGTCACAAAAGGAGATGTGGTTTTGACAATTTTCATGGCAGATTGTGGGGAGTGTACAGATTGCAAATCAACAAAGAGCAACCAATGTTCCAAGTTTCCTTTCAAGATCTATCCTTGGATGCATAGATATCCTACTAGTAGATTTACCGATCTAAACGGAGAGATCATACACCATTTCATGTTTATTTCAAGTTTTAGTGAGTACACAGTGGTTGATATTGTCAATCTAATCAAGGTTGACCCAACAATTCCTCCCAACAGGGCATGCCTCTTGAGTTGTGGTGTATCAACTGGGGTAGGTGCTGCTTGGAAAACAGCAGGTGTGGAGCCAGGGTCTACAGTAGCAATTTTTGGGCTGGGATGTATTGGATTAGCAGTTGCTGAGGGAGCTAGACTTTGTGGAGCAACTAGGATTATAGGGGTGGATGTAAACTCAGAGAAACGTGAAATTGGGAAAATTTTTGGAGTCACAGACTTCATCAATTCTGGAGAATGCGGAGACAAATCTGTGAGCCAGATTATCAAAGAGATAACTGATGGAGGAGCAGATTATTGCTTTGAGTGTGTTGGTATGGCATCATTGGTGCATGAAGCATATGCTTCTTGTAGAAAGGGTTGGGGGAAAACAATTGTTGTAGGAGTGGACAAGCCAGAATCTAGGTTGAGCCTTAGCTCTAATGAGGTCCTTTTGGATGGGAAGAGCCTTATAGGGTCTCTATTTGGAGGACTCAAACCTAAGTCTGATGTACCCATTCTCCTTAAACGTTACTTGGACAAGGAACTGAAGTTGGACGAGTTTGTCACACATGAGGTAGAGTTTAAGGACATCAATAAAGCTTTCGACTTATTGATTAAAGGACAGTCTCTTCGATGTGTGATTTGGATGGACAAATGA 1167 0.4173 MEDKKVAKTSEGSSIRCKAAVSRKPGEDLTIEEIIVAPPMFGEARIRIICTSLCHSDVTFWNLQGPPAIFPRILGHEAIGVVESVGEDVTEVTKGDVVLTIFMADCGECTDCKSTKSNQCSKFPFKIYPWMHRYPTSRFTDLNGEIIHHFMFISSFSEYTVVDIVNLIKVDPTIPPNRACLLSCGVSTGVGAAWKTAGVEPGSTVAIFGLGCIGLAVAEGARLCGATRIIGVDVNSEKREIGKIFGVTDFINSGECGDKSVSQIIKEITDGGADYCFECVGMASLVHEAYASCRKGWGKTIVVGVDKPESRLSLSSNEVLLDGKSLIGSLFGGLKPKSDVPILLKRYLDKELKLDEFVTHEVEFKDINKAFDLLIKGQSLRCVIWMDK* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g1391 388 SUPERFAMILY GroES-like 337 385 IPR011032 -
Lan9g1391 388 Pfam Zinc-binding dehydrogenase 213 336 IPR013149 -
Lan9g1391 388 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 75 89 IPR002328 GO:0008270|GO:0016491
Lan9g1391 388 PANTHER ALCOHOL DEHYDROGENASE 11 385 - -
Lan9g1391 388 SUPERFAMILY GroES-like 11 195 IPR011032 -
Lan9g1391 388 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 174 349 IPR036291 -
Lan9g1391 388 PANTHER ALCOHOL DEHYDROGENASE-LIKE 7 11 385 - -
Lan9g1391 388 Pfam Alcohol dehydrogenase GroES-like domain 42 170 IPR013154 -
Lan9g1391 388 Gene3D - 20 381 - -
Lan9g1391 388 Gene3D - 189 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g1391 Lan-Chr9 20930666 20933850 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g1391 43 340 Monolignol Biosynthesis Gene Families AT4G37990 25.413 1.30e-11 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g1391 K00121 - gmx:100806887 639.802