Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g1383 ATGAGTAACATTCTCCTATTATTGTTTATAGTTTATTTCTCTGTCTTCTTTTATGATGCTTCTGCTCTTATATCTGATGGAGTGATTCTGTTGTCACTATTGAAACACTGGACCTTTGTTCCTCATGCCATAAACTCCACATGGAATGCATCTGATTCCAATCCATGTTCATGGGTAGGAATCAAATGTGACCATGCTCATAATGTGGTCTCAGTTGACCTCAATGATCATGGCATTATTGGTCAACTTGGACCACAAATTGGACAATTGCATCACTTGCATACACTTGTGTTGTCAAGTAATAGTTTTTCAGGTAATATACCTTCAGAGTTAAGCAATTGTAGTTTGATTCAGTATTTAGATCTTTCTTATAACAGCTTTAGTGGACAAATACCTGGTAGCTTGAAAAAGTTGCAAACTTTATGGTTTATTAGCTTGGCCTCGAATCTAATGAGTGGTGAAATTCCACATTCCTTGTTTCAAATTCCTCACTTGAAAGAAGTGAGCTTTCATAGTAACCAGCTTAGTGGTTCTATCCCAGATAATATTAGCAACATGGCTGAACTGTTGAAGTTGTCTCTATATGGTAATCAGTTGTCAGGGAACATTCCTTCATCGATCGGTAATTGTTCTAAATTAGAGGCTTTGTTTTTGAATGACAACAGATTGAATGGTAACCTTCCTGAGAGTCTTCAGAATCTTGAAAATCTTGTTTATTTGATGGTCAGAAATAATAGTCTTGGAGGTACTATCCCACTTGGTTCTGGAAACTGTAAAAGATTGTTTATTTTGGATCTCTCACTTAATGCATTTAGTGGAAGCATTCCCTCTGGCTTGGGAAATTGTAGTGCTTTAGCCGAATTTGCTGCTGAGAACAACAACTTAGTTGGCAGTATCCCATCATCCTTAGGCCTGCTACATAACCTTTTAATTCTTCGCCTTTCTGAGAACCGTTTATCGGGGGAAATATCTCCAGAAATTGGCAACTGCAGATCTTTGAAGAAATTACATTTACATTCCAACCAACTGGAGGGGGGAATTCCTGATAAATTGGGAATGTTAAGTGAGTTAGAGGACCTTCAACTGTCTTTCAACCGTTTGACGGGTGAAGTCCCAGGCAGCATTTGGAGGATTGAAAGTCTTAGGAGCATCTTGGTCCACAACAATAGCCTTTTCGGGAAACTACCTTTGGAGATGACAAAGCTCGAGCATCTAAAAAACATCTCATTGTTTGACAACCGGTTCTCCGGAGTCATACCTCAAGGCTTGGGAATCAATAGCAGTTTGGTGAAGTTGGACTTCGCAGATAATAAGTTCACTGGTAATATCCCTCCCAATCTTTGCTTCGGAAAACAGTTACTTGTGATGAATATGGGGCGTAATCAACTTCAGGGTGATATACCTTCTGATGTAGGAAGATGTGCAACTCTAAGGAGGTTGATTCTCAGTGAGAATAATTTGACTGGGTTTCTTCCTGATTTTGAAAGTGATTTAAACCTCCGATACATCGACATAAGCAAAAACAACATCAGCGGAGCAATTCCATCAAATTTGAAAAATTGTAAAAATCTCACTGAAATTAATATCTCAATGAACAGGTTTAGTGGGATCATACCATCGGAGCTTGGAAAACTTGAGAAACTTGTTGTTTTGGATCTTTCACACAACAATTTGGAAGGTCCTTTGCCACCTCAGCTGTCAAATTGCACCAAAATGGACCGTTTTGATGTGGGATTCAATTTCCTAAATGGTTCATTTCCATCAAGTTTGAGGACCTGGACGAAGATATCAACAATAATATTAAGAGAGAATCATTTTACTGGAGGTATCCCGGGCGTTTTATCAGAATTTAGCATGCTACGCGAGTTACAACTTGGTGGTAATTTGTTTGGAGGCGAAATTCCACTATCGATGGGAACAATGCAAAATCTGTTCTACGGGTTGAATCTGAGTGCTAATGGATTGACAGCTGCGATTCCTTTGGAAATTGGGAGGCTAAAACAGTTGCAAAGTCTGGATTTATCCCTAAACAATTTGACAGGAAGTATAGATGTTCTTGGTGATCTTGTTTCATTAACTGAAGTCAATATCTCATATAATTTCTTCAATGGTACTCTACCAAAAAATCTGATCAAGTTTTTGAGTTCCTCGCCATCATCGTTTATGGGTAATCCTCACCTATGTGTTAATTGCTCATCTTCGCAGGACTTGAGTTGCACTAAAAATAGTTATTTGAAGGCATGTGTCGACAAGTCAACAGATCACGCTGGCATCAGTAAATTTGTAATTGTGATGATAGAAATTGGATCCTCAGTTTTTGTTTCTGCTATACTCGTAGCACTTATGCACAGATATATGCGAAGAAAAGAGAAGCCAGATGATTGTGTAAATGACTTGTGGGTAGAGAATCGACAAATACCTCTTGCTTTACTAATGAAGGCGACAAATGATCTAGCTGATTCGTATGTTATTGGTAGAGGAGCCCATGGAATTGTTTATAAAGCCGAAATTGTGTCACATAAAGCTCTAGCTGTAAAGAAGATTGTATTTGGAAGCAACCAGGGGAAGCACTTAAGTACCCTGCGCAAAGAAATTAAAGCCCTTACGTATAAGCATAAAAATTTGGTCACTTGTAGGGGCTACTATATTGGAAAGGACTTCGGTTTAATCTTATCCGATTACATGGAAAATGGAAGCCTTCATGATATTTTGCATGAAAAAGATCCCCCACCACCCTTAAGTTGGAATGTTCGGTTTAATATAGCAGTCGGAATTGCACAAGGACTAGCATATCTACACTATGATTGTATCCCACACATAGTGCATCGAGACATCAAACCAAAGAATATACTTCTTGATGCTAGTATGGAGCCTGTTATAGCTGATTTCGGTACTGCCATGTTCAGGAACCCTAGTGAGTATTCTGGTAGTAGTTCTCAATGTAGGCAAAATCTTTCAACATGCATTGCTGGTACTGCTGGCTATATTGCACCGGAGAATGCATATGCAACACTGCCAGGCAGAAAGTCCGATGTATATAGCTATGGGGTAGTTCTGCTTGAGCTATTAACCAGAAAGAAAGTATTAGTAATTTCATTCACGGATAAGAAGGAACAGGAGATCCATTTAGTTAGTTGGGTTAGATCTGTCTGGTTGACAACGGGCAAAGTTGAGAAGATCGTTGATTCAGACCTTGCAAGCGCATTTCTCAATTCAAAAGTAGTAGCAAGCCAAGTCGGTGGTGTTCTTATGTTGGCATTAAGATGTACAGAAAGGGATCCAAGGAAGAGACCAACAATGGAAGAAGTTGTTCACTTCTATCATAGAGGCAAGTTCACAAGAAGGCATGATGATGAGGTTTATGGTACTGAAGTTGTAGCCGATGTAGCACCACAACCATATACCTCTCTTGATATTTTAACCAGTGTTCCAGTTGTCAGTACTACATCAGTTTCTCCTATTCAGGGAGGCTACAATCACCACGGAGAATGTAGTACGGCTGCACCATTGAAACAGATAAAAGTTACATTCGATGTGGAGAGAAAACCGGAAGATTCTAATGACTTTGGCTGGTGGTGGGATGCTAATCAATTTCATCAGGGAAACTCTTCGGATGATTGGAAATTCATGTCTACACCGACAACTAGTACTGATGCACTTGTAGCACAACAACCATATAACTCTCTTGATCTTCTCACACATGGTCCATTAGTTACTGAGCCTTTCAATTGGTTTTTTGTCTCTAGTTGGCATAAGTATATGCAACAGAAGAAATCATTGAAATCAATGCCCAAATACTACTTCATAACACCAACCAAGGCTACTCTTGAACTAAGTGAAAGTGAGTAA 3849 0.3915 MSNILLLLFIVYFSVFFYDASALISDGVILLSLLKHWTFVPHAINSTWNASDSNPCSWVGIKCDHAHNVVSVDLNDHGIIGQLGPQIGQLHHLHTLVLSSNSFSGNIPSELSNCSLIQYLDLSYNSFSGQIPGSLKKLQTLWFISLASNLMSGEIPHSLFQIPHLKEVSFHSNQLSGSIPDNISNMAELLKLSLYGNQLSGNIPSSIGNCSKLEALFLNDNRLNGNLPESLQNLENLVYLMVRNNSLGGTIPLGSGNCKRLFILDLSLNAFSGSIPSGLGNCSALAEFAAENNNLVGSIPSSLGLLHNLLILRLSENRLSGEISPEIGNCRSLKKLHLHSNQLEGGIPDKLGMLSELEDLQLSFNRLTGEVPGSIWRIESLRSILVHNNSLFGKLPLEMTKLEHLKNISLFDNRFSGVIPQGLGINSSLVKLDFADNKFTGNIPPNLCFGKQLLVMNMGRNQLQGDIPSDVGRCATLRRLILSENNLTGFLPDFESDLNLRYIDISKNNISGAIPSNLKNCKNLTEINISMNRFSGIIPSELGKLEKLVVLDLSHNNLEGPLPPQLSNCTKMDRFDVGFNFLNGSFPSSLRTWTKISTIILRENHFTGGIPGVLSEFSMLRELQLGGNLFGGEIPLSMGTMQNLFYGLNLSANGLTAAIPLEIGRLKQLQSLDLSLNNLTGSIDVLGDLVSLTEVNISYNFFNGTLPKNLIKFLSSSPSSFMGNPHLCVNCSSSQDLSCTKNSYLKACVDKSTDHAGISKFVIVMIEIGSSVFVSAILVALMHRYMRRKEKPDDCVNDLWVENRQIPLALLMKATNDLADSYVIGRGAHGIVYKAEIVSHKALAVKKIVFGSNQGKHLSTLRKEIKALTYKHKNLVTCRGYYIGKDFGLILSDYMENGSLHDILHEKDPPPPLSWNVRFNIAVGIAQGLAYLHYDCIPHIVHRDIKPKNILLDASMEPVIADFGTAMFRNPSEYSGSSSQCRQNLSTCIAGTAGYIAPENAYATLPGRKSDVYSYGVVLLELLTRKKVLVISFTDKKEQEIHLVSWVRSVWLTTGKVEKIVDSDLASAFLNSKVVASQVGGVLMLALRCTERDPRKRPTMEEVVHFYHRGKFTRRHDDEVYGTEVVADVAPQPYTSLDILTSVPVVSTTSVSPIQGGYNHHGECSTAAPLKQIKVTFDVERKPEDSNDFGWWWDANQFHQGNSSDDWKFMSTPTTSTDALVAQQPYNSLDLLTHGPLVTEPFNWFFVSSWHKYMQQKKSLKSMPKYYFITPTKATLELSESE* 1283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g1383 1282 Gene3D Ribonuclease Inhibitor 475 738 IPR032675 -
Lan9g1383 1282 Gene3D Ribonuclease Inhibitor 305 474 IPR032675 -
Lan9g1383 1282 ProSitePatterns Serine/Threonine protein kinases active-site signature. 940 952 IPR008271 GO:0004672|GO:0006468
Lan9g1383 1282 ProSiteProfiles Protein kinase domain profile. 818 1108 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan9g1383 1282 Pfam Protein kinase domain 823 1105 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan9g1383 1282 Gene3D Phosphorylase Kinase; domain 1 780 894 - -
Lan9g1383 1282 Pfam Leucine rich repeat 499 558 IPR001611 GO:0005515
Lan9g1383 1282 Pfam Leucine rich repeat 331 391 IPR001611 GO:0005515
Lan9g1383 1282 SMART serkin_6 818 1107 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan9g1383 1282 Gene3D Transferase(Phosphotransferase) domain 1 895 1124 - -
Lan9g1383 1282 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 296 1116 - -
Lan9g1383 1282 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 10 303 - -
Lan9g1383 1282 SUPERFAMILY RNI-like 395 718 - -
Lan9g1383 1282 PANTHER OS08G0446200 PROTEIN 296 1116 - -
Lan9g1383 1282 PANTHER OS08G0446200 PROTEIN 10 303 - -
Lan9g1383 1282 Gene3D Ribonuclease Inhibitor 25 304 IPR032675 -
Lan9g1383 1282 SMART LRR_typ_2 306 330 IPR003591 -
Lan9g1383 1282 SMART LRR_typ_2 666 689 IPR003591 -
Lan9g1383 1282 SMART LRR_typ_2 234 258 IPR003591 -
Lan9g1383 1282 SMART LRR_typ_2 354 378 IPR003591 -
Lan9g1383 1282 SMART LRR_typ_2 186 210 IPR003591 -
Lan9g1383 1282 SMART LRR_typ_2 90 114 IPR003591 -
Lan9g1383 1282 SMART LRR_typ_2 545 569 IPR003591 -
Lan9g1383 1282 ProSiteProfiles Leucine-rich repeat profile. 668 690 IPR001611 GO:0005515
Lan9g1383 1282 SUPERFAMILY RNI-like 71 422 - -
Lan9g1383 1282 Pfam Leucine rich repeat N-terminal domain 25 64 IPR013210 -
Lan9g1383 1282 ProSitePatterns Protein kinases ATP-binding region signature. 824 847 IPR017441 GO:0005524
Lan9g1383 1282 SUPERFAMILY Protein kinase-like (PK-like) 802 1106 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g1383 Lan-Chr9 20886491 20891152 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g1383 14 1115 Receptor kinase-like Gene Family AT1G73080 48.925 0.0 966
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lan9g1383 Pkinase 4e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g1383 - - lang:109356786 2426.36