Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g1359 ATGGTTTCTACAGAGCAAAAGAGAGCACTACATGAGAAGCTACAACTCCTTCGTTCTATTACAAACTCTCATGCTCTAAACAAAACCTCGATCATAATCGATGCATCAAAGTATATAGAAGAGCTGAAGGAAAAAGTAGGAAGACTAAATGAAGAAATAGCCACTGCAGAAACTTCAAGTAACCTCAATGATCCATTGCCAATGGTTACAGTAGAAACCCTAGAAAAGGGGCTTCTTATAAATATTTTTGCAGCAAAAAGTTGTCCAGGTTTACTGGTTTTCATACTTGAAGCCTTTGAAGATATGGGTGTTACATTGCTGGAAGCTAGGGTTTCTTGTACTGACACTTTTCAATTTCAAGCAGTTGGAGGAGAAAATGAAGAAGCAGTTCAGACAATTGATGCAGAAGCTGTCAAACAAGTAGTGAGAGAAGCAATAAAGAATTGGACCCAAAGTGTCAATCAAGAGTAA 471 0.3779 MVSTEQKRALHEKLQLLRSITNSHALNKTSIIIDASKYIEELKEKVGRLNEEIATAETSSNLNDPLPMVTVETLEKGLLINIFAAKSCPGLLVFILEAFEDMGVTLLEARVSCTDTFQFQAVGGENEEAVQTIDAEAVKQVVREAIKNWTQSVNQE* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g1359 156 CDD ACT_UUR-ACR-like 89 146 - -
Lan9g1359 156 Coils Coil 32 59 - -
Lan9g1359 156 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 2 156 - -
Lan9g1359 156 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 2 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g1359 Lan-Chr9 20695065 20697186 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g1359 10 145 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 29.530 8.61e-10 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g1359 - - tcc:18600910 226.483
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan14g0175 14 2127037 2130808 Lan9g1359 9 20695065 20697186 PCT
Lan3g0987 3 21586521 21591017 Lan9g1359 9 20695065 20697186 PCT
Lan9g1359 9 20695065 20697186 Lan14g0175 14 2127037 2130808 PCT
Lan9g1359 9 20695065 20697186 Lan3g0987 3 21586521 21591017 PCT