Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g1358 ATGCTTGACTCAGAATCTAACATCACCCATGTTGTTGCCCCTCTCCTACCACGAGAAGAAGATCATTGTTCCCAACATGGGTCCATTTCTGGAGCAGTGTTCAACATATCAACCACCATGATTGGTGCAGGAATCATGTCAATCCCAGCCACTATGAAGGTGCTAGGAATAATTCCAGGGTTGGTGGTGATTGTGTTGGTGGCACTAGTAACAGATATCACAGTTGAGTTTATGTTAAGGTACACAAGTTCAGGCAAATCTATTACCTATGCTGGCATGGTGGGAGAATCATTTGGTCCCTTTGGATCTCTTGCTGTTAAGATTTGTGTTATCATAACTAATCTTGGTGTCCTTATTGTCTATCTCATTATTCTTGGAGATGTGCTATGTGGAAATGAGTCAAATGGAATCACACACTTGGGTATTCTACAAGATTGGTTTGGCATTCATTGGTGGACTTCTCGTGCTTTTGCTCTTCTAATACTTGCACTCTTCATTATTCTTCCATTGGTTATGTTAAAGCGTGTTGATTCACTCAGATATACTTCTGCAATATCAATCCTACTAGCATTAGTCTTTGTTGTAATATGCTCTTCCATGTCATTTTATGCATTATGGCGCGGCAAAACTCAATCGCCTCGGATACTCCCTGATTTCTCTCAAGTCACTGTCTTAGACCTTTTCACCACTGTCCCAATCTTTGTCACAGGTTTCGGCTTCCATGTCAATGTTCATCCTATTAGAGCAGAGCTTGGAAAACCAGGAGACATGAATTGGGCAGTGCGGATTTCGTTGATAATCTCCGTGGTCATTTACTTCGCGATAGGCTTCTTCGGGTACCTATTGTTTGGGGACTCAATCATGGCTGATATGCTAGTAAACTTTGATCATAGTTCCAATACCCCTGCAGGTCGATTTCTCAACGACATTGTTCGATTAAGCTATGCACTCCATCTAGCGCTTGTGTTCCCCATCATGAGCTATTCCTTGAGGGCCAACATAGATGAACTAGTATTCTCAAACAAAAATAGGCCTCCCCTGGCATTAGACACACCTAGATTTGTGTCACTAACTCTATCTTTGCTTGCATTAACATACTTGGTGGCTGTGGCCATCCCAAACATTTGGGATTTCTATCAATTTTTAGGATCCACAACCATTGTTTGTCTCTCATTCATTTTCCCTGCCTCAATCATTCTAAGGGATATGCATGGCATCTCAACCACAAAAGATAAGGTGGTGGCAATAGTGATGATTGTTTTGGCTGTGGGGACAAGTGCAATTGCTATATGGACCAACTTGTATAGTTCAATTGCTCACTAG 1323 0.418 MLDSESNITHVVAPLLPREEDHCSQHGSISGAVFNISTTMIGAGIMSIPATMKVLGIIPGLVVIVLVALVTDITVEFMLRYTSSGKSITYAGMVGESFGPFGSLAVKICVIITNLGVLIVYLIILGDVLCGNESNGITHLGILQDWFGIHWWTSRAFALLILALFIILPLVMLKRVDSLRYTSAISILLALVFVVICSSMSFYALWRGKTQSPRILPDFSQVTVLDLFTTVPIFVTGFGFHVNVHPIRAELGKPGDMNWAVRISLIISVVIYFAIGFFGYLLFGDSIMADMLVNFDHSSNTPAGRFLNDIVRLSYALHLALVFPIMSYSLRANIDELVFSNKNRPPLALDTPRFVSLTLSLLALTYLVAVAIPNIWDFYQFLGSTTIVCLSFIFPASIILRDMHGISTTKDKVVAIVMIVLAVGTSAIAIWTNLYSSIAH* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g1358 440 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 12 439 - -
Lan9g1358 440 Pfam Transmembrane amino acid transporter protein 27 427 IPR013057 -
Lan9g1358 440 PANTHER AMINO ACID TRANSPORTER 12 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g1358 Lan-Chr9 20686923 20690193 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g1358 15 440 Amino Acid or Auxin Permease AAAP Family AT3G56200 53.147 6.05e-156 447
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g1358 - - ahf:112765408 654.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan2g1166 2 22860582 22863327 Lan9g1358 9 20686923 20690193 LSH
Lan9g1358 9 20686923 20690193 Lan15g0088 15 603532 606230 PCT